ModCRE DB

Transcription factor

A0A804HL89 - PPARG

Peroxisome proliferator-activated receptor gamma (PPAR-gamma) (Nuclear receptor subfamily 1 group C member 3)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 367 aa

45 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3
MotifPredictionSourceDNA bindingSupportLogoActions
M11139_2.00 NN 70+% CisBP AAGTAGGTCACCGTGACCTACTT 99.7% identity Open · Scan
MA0065.1 NN 70+% JASPAR CCAGGGGTCAAAGGTCATCG 99.7% identity Open · Scan
MA0065.2 NN 70+% JASPAR GTAGGGCAAAGGTCA 97.9% identity Open · Scan
Nearest Neighbor (70% - 40%)42
MotifPredictionSourceDNA bindingSupportLogoActions
MA1148.1 NN 70-40% JASPAR ATGTAGGTCAAAGGTCAT 65.2% identity Open · Scan
M09275_2.00 NN 70-40% CisBP GGGTCACTTCAGGTCAG 65.0% identity Open · Scan
M05584_2.00 NN 70-40% CisBP AGAGGTCACGACCTCT 64.7% identity Open · Scan
MA1550.1 NN 70-40% JASPAR AGGGGTCAAAGGTCAA 64.7% identity Open · Scan
M11192_2.00 NN 70-40% CisBP GGGGTCACG 59.7% identity Open · Scan
MA1531.1 NN 70-40% JASPAR GGGTCAGTAGGTCAG 59.4% identity Open · Scan
M09609_2.00 NN 70-40% CisBP CCAGGAACAG 59.2% identity Open · Scan
M03435_2.00 NN 70-40% CisBP GGGGTCAAAGGTCA 58.3% identity Open · Scan
MA0855.1 NN 70-40% JASPAR GGGGTCAAAGGTCA 58.3% identity Open · Scan
MA1541.1 NN 70-40% JASPAR GTCAAGTTCAAGGTCAA 56.4% identity Open · Scan
MA1111.1 NN 70-40% JASPAR CAAAGGTCAAA 56.0% identity Open · Scan
M05590_2.00 NN 70-40% CisBP TTCAAGGTCAC 55.8% identity Open · Scan
M06417_2.00 NN 70-40% CisBP CAGTCCGAAGGTCACCGC 55.8% identity Open · Scan
M00822_2.00 NN 70-40% CisBP GAGGTCAC 54.6% identity Open · Scan
M05661_2.00 NN 70-40% CisBP GGGGTCAAAGGTCAG 54.6% identity Open · Scan
MA0017.1 NN 70-40% JASPAR TGACCTTTGAACCT 54.6% identity Open · Scan
M02413_2.00 NN 70-40% CisBP CGAGATCAA 54.3% identity Open · Scan
M00812_2.00 NN 70-40% CisBP AGAGGTCACG 53.5% identity Open · Scan
M05599_2.00 NN 70-40% CisBP AAAGGTCAA 53.5% identity Open · Scan
M05635_2.00 NN 70-40% CisBP GTGACCTCAATGAGGTCAC 53.5% identity Open · Scan
MA1535.1 NN 70-40% JASPAR CGAGGTCAC 53.5% identity Open · Scan
M05669_2.00 NN 70-40% CisBP GAGGTCAT 53.2% identity Open · Scan
M09616_2.00 NN 70-40% CisBP TTCAAGGTCA 53.2% identity Open · Scan
MA0504.1 NN 70-40% JASPAR AGGGGTCAGAGGTCA 53.2% identity Open · Scan
MA0505.1 NN 70-40% JASPAR AAGTTCAAGGTCAGC 53.2% identity Open · Scan
MA1540.1 NN 70-40% JASPAR GTCAAGGTCAC 53.2% identity Open · Scan
MA0677.1 NN 70-40% JASPAR GAGGTCAAAGGTCA 53.0% identity Open · Scan
M03927_2.00 NN 70-40% CisBP GAAACTAGAGCA 52.9% identity Open · Scan
M02393_2.00 NN 70-40% CisBP AGAGGTCAC 52.2% identity Open · Scan
M05621_2.00 NN 70-40% CisBP TAGGTCATGACCTA 52.0% identity Open · Scan
M02418_2.00 NN 70-40% CisBP CGGAAGCAAA 51.9% identity Open · Scan
MA1539.1 NN 70-40% JASPAR AAGGTCACTGACCTT 51.8% identity Open · Scan
M01298_2.00 NN 70-40% CisBP AAAGGTCA 50.6% identity Open · Scan
M03930_2.00 NN 70-40% CisBP AACTAGAGCAC 50.6% identity Open · Scan
M09283_2.00 NN 70-40% CisBP TGAGGTCAAAAAAGTTCAG 50.6% identity Open · Scan
MA0592.1 NN 70-40% JASPAR CCAAGGTCACA 50.6% identity Open · Scan
MA0592.2 NN 70-40% JASPAR TTCAAGGTCAT 50.6% identity Open · Scan
MA1533.1 NN 70-40% JASPAR ATGAACTCGATGAACTC 50.6% identity Open · Scan
M00689_2.00 NN 70-40% CisBP AAAGATCAA 50.5% identity Open · Scan
MA1151.1 NN 70-40% JASPAR ATAAGTAGGTCA 50.4% identity Open · Scan
M08226_2.00 NN 70-40% CisBP CAAGGTCA 50.0% identity Open · Scan
MA0727.1 NN 70-40% JASPAR GGGAACACAATGTTCCC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 367 aa
56-136

Region 56-136 0 PWM

Residues
81 aa
Domains
PF00105 · Double treble clef zinc finger, C4 type
3D models
1 active PDB
Templates
1A6Y
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 56-1361 model
Actions
Predicted = Low DIMER_A0A804HL89:56:136_1a6y_B_1 1a6y 56-136 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
59-125PF00105Double treble clef zinc finger, C4 typeoverlaps 56-136
240-350PF00104Ligand-binding domain of nuclear hormone receptorNo overlap with loaded model regions