Region 1-52 0 PWM
- Residues
- 52 aa
- Domains
- PF00105 · Double treble clef zinc finger, C4 type
- 3D models
- 1 active PDB
- Templates
- 1DSZ
- Sources
- Structure model
Transcription factor
A0A8I5KQX3 - RARB
Retinoic acid receptor beta (Nuclear receptor subfamily 1 group B member 2)
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 167 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M05563_2.00 | Known | CisBP | AAAAGGTCAA | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
167 aa
1-52
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 1-521 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | DIMER_A0A8I5KQX3:1:52_1dsz_A_1 | 1dsz | 1-52 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 1-46 | PF00105 | Double treble clef zinc finger, C4 type | overlaps 1-52 |
| 117-158 | PF00104 | Ligand-binding domain of nuclear hormone receptor | No overlap with loaded model regions |