ModCRE DB

Transcription factor

A0A8I5KRF8 - SALL1

Sal-like protein 1

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 1196 aa

15 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M08979_2.00 NN 70+% CisBP CCCACCCTCC 80.5% identity Open · Scan
Nearest Neighbor (70% - 40%)14
MotifPredictionSourceDNA bindingSupportLogoActions
M09002_2.00 NN 70-40% CisBP CCACCTGG 60.4% identity Open · Scan
MA1558.1 NN 70-40% JASPAR GGCAGGTGCA 60.4% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 58.5% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 57.1% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 56.0% identity Open · Scan
M00217_2.00 NN 70-40% CisBP TTACTCAATAT 54.0% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 53.3% identity Open · Scan
MA1655.1 NN 70-40% JASPAR GGGAACAGCCAC 52.8% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 52.1% identity Open · Scan
M00647_2.00 NN 70-40% CisBP CCCCCCC 50.0% identity Open · Scan
M01883_2.00 NN 70-40% CisBP TGCCCCTGA 50.0% identity Open · Scan
M03583_2.00 NN 70-40% CisBP GGATGCTGTG 50.0% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 50.0% identity Open · Scan
MA0744.1 NN 70-40% JASPAR ATGCAACAGGTGG 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1196 aa
450-499

Region 450-499 0 PWM

Residues
50 aa
Domains
PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
3UK3
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 450-4991 model
Actions
Predicted = Low TFS_A0A8I5KRF8:450:499_3uk3_C_1 3uk3 450-499 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
477-499PF00096Zinc finger, C2H2 typeoverlaps 450-499
734-756PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
766-788PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
1003-1023PF12874Zinc-finger of C2H2 typeNo overlap with loaded model regions
1029-1051PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
1134-1156PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions