ModCRE DB

Transcription factor

A0A8I5KTY6 - ZKSCAN8P1

ZKSCAN8 pseudogene 1

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 269 aa

148 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M00939_2.00 NN 70+% CisBP CCACCTCA 72.9% identity Open · Scan
Nearest Neighbor (70% - 40%)147
MotifPredictionSourceDNA bindingSupportLogoActions
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 68.7% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 68.4% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 67.4% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 67.2% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 67.0% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 67.0% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 67.0% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 66.0% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 65.7% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 65.6% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 65.1% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 65.0% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 64.7% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 64.7% identity Open · Scan
M08365_2.00 NN 70-40% CisBP GCCAGCAGCCATCAG 64.6% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 64.6% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 64.4% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 64.4% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 64.2% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 63.7% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 63.6% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 63.5% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 63.5% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 63.5% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 63.5% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 63.5% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 63.5% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 63.1% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 63.1% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 62.9% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 62.8% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 62.6% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 62.5% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 62.5% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 62.4% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 62.3% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 62.3% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 62.0% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 61.8% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 61.7% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 61.5% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 61.2% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 61.2% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 61.1% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 60.8% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 60.7% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 60.3% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 60.3% identity Open · Scan
M07740_2.00 NN 70-40% CisBP TCCTGATTCCACACTCAAACATAACTTT 60.3% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 60.2% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 60.2% identity Open · Scan
M07666_2.00 NN 70-40% CisBP ATCTAGCCCCTGCCTACC 60.1% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 60.1% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 60.0% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 60.0% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 60.0% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 59.9% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 59.8% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 59.8% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 59.8% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 59.5% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 59.4% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 59.4% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 59.4% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 59.4% identity Open · Scan
M07691_2.00 NN 70-40% CisBP CCTGCAGCCACCTTGGCCTTG 59.0% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 58.8% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 58.6% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 58.5% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 58.4% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 58.2% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 58.2% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 58.2% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 58.1% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 57.7% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 57.7% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 57.6% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 57.6% identity Open · Scan
M07595_2.00 NN 70-40% CisBP GCCTGTTCCTCTCCC 57.5% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 57.5% identity Open · Scan
M08903_2.00 NN 70-40% CisBP ATTCCATTCTATTCCATTCT 57.4% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 57.3% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 57.2% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 57.2% identity Open · Scan
M08386_2.00 NN 70-40% CisBP GCCTTAAAAGCTCAGCAC 57.2% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 57.0% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 56.8% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 56.7% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 56.7% identity Open · Scan
M02913_2.00 NN 70-40% CisBP TTCGTGGCATTTTTCTA 56.6% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 56.6% identity Open · Scan
M07693_2.00 NN 70-40% CisBP CTCCTGTGTGTGCCTTGGCTG 56.6% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 56.6% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 56.6% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 56.4% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 56.4% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 56.4% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 56.3% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 56.3% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 56.1% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 56.1% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 56.1% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 55.8% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 55.7% identity Open · Scan
M07746_2.00 NN 70-40% CisBP CAGCTGGCGCCCAACATGGGTCCC 55.6% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 55.5% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 55.5% identity Open · Scan
M07638_2.00 NN 70-40% CisBP TGCAGCTCCCTGCCC 55.2% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 55.0% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 54.9% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 54.8% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 54.6% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 54.5% identity Open · Scan
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 54.5% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 54.5% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 54.1% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 54.1% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 53.6% identity Open · Scan
M07770_2.00 NN 70-40% CisBP CTTGGACTT 53.3% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 53.3% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 53.1% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 53.0% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 53.0% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 53.0% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 52.9% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 52.8% identity Open · Scan
M07607_2.00 NN 70-40% CisBP GGCTCCACG 52.8% identity Open · Scan
MA0750.1 NN 70-40% JASPAR GGCGACCACCGA 52.2% identity Open · Scan
M06108_2.00 NN 70-40% CisBP ACAACAACAAC 51.7% identity Open · Scan
M07680_2.00 NN 70-40% CisBP AACCCCAAC 51.6% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 51.5% identity Open · Scan
M00217_2.00 NN 70-40% CisBP TTACTCAATAT 51.4% identity Open · Scan
M03702_2.00 NN 70-40% CisBP GACCCCCCACGACGC 51.2% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 51.1% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 50.9% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 50.8% identity Open · Scan
MA0056.1 NN 70-40% JASPAR TGGGGA 50.8% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 50.7% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 50.7% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 50.6% identity Open · Scan
M00250_2.00 NN 70-40% CisBP AATGCTAACT 50.4% identity Open · Scan
M07645_2.00 NN 70-40% CisBP CTCCTT 50.4% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 50.3% identity Open · Scan
M07631_2.00 NN 70-40% CisBP AATTTCAAAAATGCTATGGGC 50.2% identity Open · Scan
M07750_2.00 NN 70-40% CisBP CTTCTGACACCA 50.2% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 50.0% identity Open · Scan
M07623_2.00 NN 70-40% CisBP GTCTAATAGAGCTGGGCTGCA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 269 aa
100-258

Region 100-258 0 PWM

Residues
159 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5T0U
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 100-2581 model
Actions
Predicted = Low TFS_A0A8I5KTY6:100:258_5t0u_A_1 5t0u 100-258 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
44-66PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
100-122PF00096Zinc finger, C2H2 typeoverlaps 100-258
128-150PF00096Zinc finger, C2H2 typeoverlaps 100-258
156-178PF00096Zinc finger, C2H2 typeoverlaps 100-258
188-206PF00096Zinc finger, C2H2 typeoverlaps 100-258
212-234PF00096Zinc finger, C2H2 typeoverlaps 100-258
240-262PF00096Zinc finger, C2H2 typeoverlaps 100-258