ModCRE DB

Transcription factor

A0A8I5KUQ1 - GRHL3

Grainyhead like transcription factor 3

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 516 aa

9 Generated PWM 9 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE9
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_A0A8I5KUQ1_A0A8I5KUQ1_HUMAN:60:91_4qtr_A_1 ModCRE Homology model TAATATTTATTGA Region 60-91 · 1 3D model Open · Scan
TFS_tr_A0A8I5KUQ1_A0A8I5KUQ1_HUMAN:229:463_5mpf_B_1 ModCRE Homology model GTAAAAATGTGG Region 229-463 · 1 3D model Open · Scan
TFS_tr_A0A8I5KUQ1_A0A8I5KUQ1_HUMAN:229:464_5mpf_A_1 ModCRE Homology model AAACTTTTTTTA Region 229-464 · 1 3D model Open · Scan
a0a8i5kuq1.af3.0 ModCRE AlphaFold3 model TTAAAAATTTTAACGTCCTTTT AlphaFold3 model · ModCRE PWM Open · Scan
a0a8i5kuq1.af3.1 ModCRE AlphaFold3 model TTAAAAATTTTAACGTCCTTTT AlphaFold3 model · ModCRE PWM Open · Scan
a0a8i5kuq1.af3.2 ModCRE AlphaFold3 model TAAAAAAAGTTTATTT AlphaFold3 model · ModCRE PWM Open · Scan
a0a8i5kuq1.af3.3 ModCRE AlphaFold3 model GAAAAAAAGTTAATGTTA AlphaFold3 model · ModCRE PWM Open · Scan
a0a8i5kuq1.af3.4 ModCRE AlphaFold3 model TAAAAAAAGTTTTCGTTT AlphaFold3 model · ModCRE PWM Open · Scan
a0a8i5kuq1.af3.5 ModCRE AlphaFold3 model TAAACAAAGTTTAAGT AlphaFold3 model · ModCRE PWM Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 516 aa
60-91
229-464

Region 60-91 1 PWM

Residues
32 aa
Domains
No overlapping PFAM annotation recorded
3D models
1 active PDB
Templates
4QTR
Sources
Predicted = Low
Scan this region Show models

Region 229-464 2 PWM

Residues
236 aa
Domains
PF04516 · CP2 transcription factor
3D models
2 active PDBs · 2 summary rows
Templates
5MPF
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
9 active PDB models 2 summary rows
Region 60-911 model
Actions
Predicted = Low DIMER_tr_A0A8I5KUQ1_A0A8I5KUQ1_HUMAN:60:91_4qtr_A_1 4qtr 60-91 View model · PDB
Region 229-4642 models · 2 summary rows
Actions
Predicted = Low TFS_tr_A0A8I5KUQ1_A0A8I5KUQ1_HUMAN:229:463_5mpf_B_1 5mpf 229-463 View model · PDB
Predicted = Low TFS_tr_A0A8I5KUQ1_A0A8I5KUQ1_HUMAN:229:464_5mpf_A_1 5mpf 229-464 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 5mpf 229:464 229 463 P:B · DNA:E,F 55.3% / 71.1% 100 View · PDB TFS_tr_A0A8I5KUQ1_A0A8I5KUQ1_HUMAN:229:463_5mpf_B_1
2 5mpf 229:464 229 464 P:A · DNA:E,F 54.7% / 69.9% 100 View · PDB TFS_tr_A0A8I5KUQ1_A0A8I5KUQ1_HUMAN:229:464_5mpf_A_1
Full sequence / unlocalized models6 models
SourceModelTemplateResidues modeledActions
Predicted = Lowa0a8i5kuq1.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a8i5kuq1.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a8i5kuq1.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a8i5kuq1.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a8i5kuq1.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a8i5kuq1.af3.5-Full sequence / not localizedView model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
226-420PF04516CP2 transcription factoroverlaps 229-464