Region 118-232 0 PWM
- Residues
- 115 aa
- Domains
- PF00320 · GATA zinc finger PF00320 · GATA zinc finger
- 3D models
- 1 active PDB
- Templates
- 3VD6
- Sources
- Structure model
Transcription factor
A0A8Q3SIP6 - GATA1
GATA binding protein 1
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 335 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M10581_2.00 | Known | CisBP | GCAGATAACA | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
335 aa
118-232
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 118-2321 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_A0A8Q3SIP6:118:232_3vd6_C_1 | 3vd6 | 118-232 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 121-154 | PF00320 | GATA zinc finger | overlaps 118-232 |
| 175-206 | PF00320 | GATA zinc finger | overlaps 118-232 |