Transcription factor

A0A8V8TMU9 - REL

REL proto-oncogene, NF-kB subunit

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 561 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3

Motif	Prediction	Source	DNA binding	Support	Actions
MA0101.1	NN 70+%	JASPAR	GGGGATTTCC	90.6% identity	Open · Scan
M02711_2.00	NN 70+%	CisBP	GGGAATTTCC	79.3% identity	Open · Scan
M03448_2.00	NN 70+%	CisBP	AGGGGATTCCCCT	70.8% identity	Open · Scan

Nearest Neighbor (70% - 40%)3

Motif	Prediction	Source	DNA binding	Support	Actions
MA0107.1	NN 70-40%	JASPAR	GGGAATTTCC	63.6% identity	Open · Scan
M08038_2.00	NN 70-40%	CisBP	CTCTTCCTCCCTCCTCTTCTCCTCTCCTCT	63.2% identity	Open · Scan
MA1117.1	NN 70-40%	JASPAR	GAATTCCCCGG	50.0% identity	Open · Scan

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 561 aa

8-279

Residues: 272 aa
Domains: PF00554 · Rel homology DNA-binding domain PF16179 · Rel homology dimerisation domain
3D models: 1 active PDB
Templates: 1RAM
Sources: Structure model

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 8-2791 model

				Actions
Predicted = Low	DIMER_A0A8V8TMU9:8:279_1ram_B_1	1ram	8-279	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
10-178	PF00554	Rel homology DNA-binding domain	overlaps 8-279
187-279	PF16179	Rel homology dimerisation domain	overlaps 8-279