ModCRE DB

Transcription factor

A0AA34QVT6 - ZNF852

Zinc finger protein 852

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 294 aa

148 Generated PWM 24 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)137
MotifPredictionSourceDNA bindingSupportLogoActions
M00952_2.00 NN 70-40% CisBP GGATGCTC 66.6% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 66.2% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 64.8% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 64.7% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 64.2% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 63.5% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 63.5% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 63.5% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 63.0% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 63.0% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 63.0% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 63.0% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 62.8% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 62.8% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 62.3% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 62.3% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 62.3% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 62.3% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 62.0% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 61.8% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 61.8% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 61.7% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 61.4% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 61.4% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 61.1% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 60.9% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 60.7% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 60.3% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 60.1% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 59.8% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 59.8% identity Open · Scan
M07693_2.00 NN 70-40% CisBP CTCCTGTGTGTGCCTTGGCTG 59.7% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 59.6% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 59.6% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 59.4% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 59.4% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 59.4% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 59.3% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 59.1% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 59.0% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 58.9% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 58.9% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 58.9% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 58.9% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 58.7% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 58.5% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 58.5% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 58.5% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 58.2% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 58.2% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 58.2% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 58.2% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 58.2% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 58.2% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 58.0% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 58.0% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 57.9% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 57.8% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 57.8% identity Open · Scan
M07595_2.00 NN 70-40% CisBP GCCTGTTCCTCTCCC 57.5% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 57.5% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 57.5% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 57.5% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 57.5% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 57.5% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 57.5% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 57.2% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 57.2% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 56.9% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 56.9% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 56.8% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 56.7% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 56.7% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 56.7% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 56.7% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 56.7% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 56.5% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 56.5% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 56.4% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 56.4% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 56.2% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 56.0% identity Open · Scan
M07638_2.00 NN 70-40% CisBP TGCAGCTCCCTGCCC 55.9% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 55.8% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 55.8% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 55.7% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 55.7% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 55.5% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 55.5% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 55.4% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 55.4% identity Open · Scan
M08386_2.00 NN 70-40% CisBP GCCTTAAAAGCTCAGCAC 55.4% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 55.3% identity Open · Scan
M07740_2.00 NN 70-40% CisBP TCCTGATTCCACACTCAAACATAACTTT 55.1% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 55.0% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 54.7% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 54.4% identity Open · Scan
MA0056.1 NN 70-40% JASPAR TGGGGA 54.0% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 53.6% identity Open · Scan
M07650_2.00 NN 70-40% CisBP GGTCTATAAAAGGGGGGCCGCGGGGGGG 53.6% identity Open · Scan
M07770_2.00 NN 70-40% CisBP CTTGGACTT 53.5% identity Open · Scan
M07715_2.00 NN 70-40% CisBP CCGCCGCCGCCGTGG 53.4% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 53.4% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 53.4% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 53.3% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 53.3% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 53.2% identity Open · Scan
M02913_2.00 NN 70-40% CisBP TTCGTGGCATTTTTCTA 52.9% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 52.8% identity Open · Scan
MA1592.1 NN 70-40% JASPAR GGTATGAGTTCTCGCT 52.8% identity Open · Scan
MA1652.1 NN 70-40% JASPAR GGAGGAGGTGAGAA 52.7% identity Open · Scan
M00785_2.00 NN 70-40% CisBP TTCACTTCCT 52.4% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 52.3% identity Open · Scan
M00774_2.00 NN 70-40% CisBP TTAGTATACACAAGT 52.2% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 52.2% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 52.1% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 51.9% identity Open · Scan
M07618_2.00 NN 70-40% CisBP CCTTTGGTGCTC 51.8% identity Open · Scan
M07680_2.00 NN 70-40% CisBP AACCCCAAC 51.6% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 51.6% identity Open · Scan
M07607_2.00 NN 70-40% CisBP GGCTCCACG 51.5% identity Open · Scan
M07685_2.00 NN 70-40% CisBP CTTTCCAGCCAC 51.4% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 51.2% identity Open · Scan
M07754_2.00 NN 70-40% CisBP CGCCCCCTCCCT 51.2% identity Open · Scan
M07586_2.00 NN 70-40% CisBP GGGACCCGGGTGGGGGCGTCCCCC 50.9% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 50.8% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 50.6% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 50.6% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 50.5% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 50.3% identity Open · Scan
M00217_2.00 NN 70-40% CisBP TTACTCAATAT 50.0% identity Open · Scan
M03682_2.00 NN 70-40% CisBP ACGCCACGCCCAGT 50.0% identity Open · Scan
M07688_2.00 NN 70-40% CisBP GAGCCCCAAGCA 50.0% identity Open · Scan
M07701_2.00 NN 70-40% CisBP CCTGGGCTAGGCCCTGGC 50.0% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 50.0% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 50.0% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 50.0% identity Open · Scan
ModCRE11
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_A0AA34QVT6_A0AA34QVT6_HUMAN:103:265_5v3j_E_1 ModCRE Homology model GCCAGAGGTGGGCCCGGTCAGAAAGT Region 103-265 · 1 3D model Open · Scan
TFS_tr_A0AA34QVT6_A0AA34QVT6_HUMAN:103:265_5v3m_C_1 ModCRE Homology model TCCGGGGGGGGGGGGTGCAAAAAGC Region 103-265 · 1 3D model Open · Scan
TFS_tr_A0AA34QVT6_A0AA34QVT6_HUMAN:103:265_5wjq_D_1 ModCRE Homology model TTGGGGGGGGCTAAATGGAAAAAACT Region 103-265 · 1 3D model Open · Scan
TFS_tr_A0AA34QVT6_A0AA34QVT6_HUMAN:119:264_2i13_A_1 ModCRE Homology model GTTCACAGCCACCTAGGGAAA Region 119-264 · 1 3D model Open · Scan
TFS_tr_A0AA34QVT6_A0AA34QVT6_HUMAN:155:265_5ei9_E_1 ModCRE Homology model CCCCGGGGGGGAGGGGC Region 155-265 · 1 3D model Open · Scan
a0aa34qvt6.af3.0 ModCRE AlphaFold3 model AAAAGGGGGGGAGGGGGGGCCCCCT AlphaFold3 model · ModCRE PWM Open · Scan
a0aa34qvt6.af3.1 ModCRE AlphaFold3 model TACACCTTCTGGGGCCCCCCTGGGGT AlphaFold3 model · ModCRE PWM Open · Scan
a0aa34qvt6.af3.2 ModCRE AlphaFold3 model AAAAGGGGGGGAGGGGGGGCCCCCC AlphaFold3 model · ModCRE PWM Open · Scan
a0aa34qvt6.af3.3 ModCRE AlphaFold3 model CCCCTGGGGGGCCCCCCAAGGTTGG AlphaFold3 model · ModCRE PWM Open · Scan
a0aa34qvt6.af3.4 ModCRE AlphaFold3 model AAGGTGCCCCTCCCCCCCCCCGGGGG AlphaFold3 model · ModCRE PWM Open · Scan
a0aa34qvt6.af3.5 ModCRE AlphaFold3 model ATGTTCCCCCCCCCCCCCCCCGGGG AlphaFold3 model · ModCRE PWM Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 294 aa
103-265

Region 103-265 5 PWM

Residues
163 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5EI9, 5V3J, 5V3M, 5WJQ
Sources
Predicted = Low
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
24 active PDB models 6 summary rows
Region 103-2656 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_A0AA34QVT6_A0AA34QVT6_HUMAN:212:261_1llm_C_1 1llm 212-261 View model · PDB
Predicted = Low TFS_tr_A0AA34QVT6_A0AA34QVT6_HUMAN:103:265_5v3j_E_1 5v3j 103-265 View model · PDB
Predicted = Low TFS_tr_A0AA34QVT6_A0AA34QVT6_HUMAN:103:265_5v3m_C_1 5v3m 103-265 View model · PDB
Predicted = Low TFS_tr_A0AA34QVT6_A0AA34QVT6_HUMAN:103:265_5wjq_D_1 5wjq 103-265 View model · PDB
Predicted = Low TFS_tr_A0AA34QVT6_A0AA34QVT6_HUMAN:119:264_2i13_A_1 2i13 119-264 View model · PDB
Predicted = Low TFS_tr_A0AA34QVT6_A0AA34QVT6_HUMAN:155:265_5ei9_E_1 5ei9 155-265 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
5 5ei9 103:277 155 265 P:E · DNA:A,B 60.4% / 69.4% 100 View · PDB TFS_tr_A0AA34QVT6_A0AA34QVT6_HUMAN:155:265_5ei9_E_1
1 2i13 103:277 119 264 P:A · DNA:C,D 56.8% / 67.1% 94 View · PDB TFS_tr_A0AA34QVT6_A0AA34QVT6_HUMAN:119:264_2i13_A_1
2 5v3m 103:277 103 265 P:C · DNA:A,B 49.1% / 69.3% 58 View · PDB TFS_tr_A0AA34QVT6_A0AA34QVT6_HUMAN:103:265_5v3m_C_1
3 5v3j 103:277 103 265 P:E · DNA:A,B 49.1% / 69.3% 58 View · PDB TFS_tr_A0AA34QVT6_A0AA34QVT6_HUMAN:103:265_5v3j_E_1
4 5wjq 103:277 103 265 P:D · DNA:A,B 48.5% / 68.7% 57 View · PDB TFS_tr_A0AA34QVT6_A0AA34QVT6_HUMAN:103:265_5wjq_D_1
1 1llm 103:277 212,212 261,261 P:C,D · DNA:A,B 48.0% / 64.0% 57,58 View · PDB DIMER_tr_A0AA34QVT6_A0AA34QVT6_HUMAN:212:261_1llm_C_1
Full sequence / unlocalized models18 models
SourceModelTemplateResidues modeledActions
Predicted = Lowa0aa34qvt6.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0aa34qvt6.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0aa34qvt6.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0aa34qvt6.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0aa34qvt6.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0aa34qvt6.af3.5-Full sequence / not localizedView model · PDB
Predicted = Lowa0aa34qvt6_dimer.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0aa34qvt6_dimer.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0aa34qvt6_dimer.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0aa34qvt6_dimer.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0aa34qvt6_dimer.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0aa34qvt6_dimer.af3.5-Full sequence / not localizedView model · PDB
Predicted = Lowa0aa34qvt6_monomer.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0aa34qvt6_monomer.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0aa34qvt6_monomer.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0aa34qvt6_monomer.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0aa34qvt6_monomer.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0aa34qvt6_monomer.af3.5-Full sequence / not localizedView model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
130-152PF00096Zinc finger, C2H2 typeoverlaps 103-265
158-180PF00096Zinc finger, C2H2 typeoverlaps 103-265
186-208PF00096Zinc finger, C2H2 typeoverlaps 103-265
214-236PF00096Zinc finger, C2H2 typeoverlaps 103-265
242-264PF00096Zinc finger, C2H2 typeoverlaps 103-265