ModCRE DB

Transcription factor

A0AAQ5BIH9 - ZIM2

Zinc finger imprinted 2

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 379 aa

15 Generated PWM 12 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)3
MotifPredictionSourceDNA bindingSupportLogoActions
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 52.6% identity Open · Scan
M01439_2.00 NN 70-40% CisBP TTACGCCACA 51.1% identity Open · Scan
M08955_2.00 NN 70-40% CisBP GATCCTCCCGCCTCAGCCTCCC 50.0% identity Open · Scan
ModCRE12
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_A0AAQ5BIH9_A0AAQ5BIH9_HUMAN:319:364_1llm_C_1 ModCRE Homology model CCGCGCGCGAAC Region 319-364 · 1 3D model Open · Scan
TFS_tr_A0AAQ5BIH9_A0AAQ5BIH9_HUMAN:180:379_5v3j_E_1 ModCRE Homology model TCGAGGAAACCCCTTTTA Region 180-379 · 1 3D model Open · Scan
TFS_tr_A0AAQ5BIH9_A0AAQ5BIH9_HUMAN:180:379_5v3m_C_1 ModCRE Homology model GCGGGATGATCCCCAATTG Region 180-379 · 1 3D model Open · Scan
TFS_tr_A0AAQ5BIH9_A0AAQ5BIH9_HUMAN:182:286_5ei9_E_1 ModCRE Homology model CCCCTGGTACCACCCCA Region 182-286 · 1 3D model Open · Scan
TFS_tr_A0AAQ5BIH9_A0AAQ5BIH9_HUMAN:182:369_5wjq_D_1 ModCRE Homology model GTGCCCCCCCCAGCCCTTGCCCCGCCG Region 182-369 · 1 3D model Open · Scan
TFS_tr_A0AAQ5BIH9_A0AAQ5BIH9_HUMAN:189:340_2i13_A_1 ModCRE Homology model GATATACATGCGGTTCTTTTT Region 189-340 · 1 3D model Open · Scan
a0aaq5bih9.af3.0 ModCRE AlphaFold3 model TGCAGTGGGCGTACACGATGGGTGAAAAA AlphaFold3 model · ModCRE PWM Open · Scan
a0aaq5bih9.af3.1 ModCRE AlphaFold3 model TGTGATGGCCAAAACCGATCCTGGCGC AlphaFold3 model · ModCRE PWM Open · Scan
a0aaq5bih9.af3.2 ModCRE AlphaFold3 model TATTGAGGGCGAGCCCCGTCCTGGGGG AlphaFold3 model · ModCRE PWM Open · Scan
a0aaq5bih9.af3.3 ModCRE AlphaFold3 model TGCAGTGGGCGTACACGATGGGTGAAAAA AlphaFold3 model · ModCRE PWM Open · Scan
a0aaq5bih9.af3.4 ModCRE AlphaFold3 model AAAAAACGATACAGTCGAGCATCATGA AlphaFold3 model · ModCRE PWM Open · Scan
a0aaq5bih9.af3.5 ModCRE AlphaFold3 model AAAAAAGCGGATATACCGG AlphaFold3 model · ModCRE PWM Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 379 aa
180-379

Region 180-379 6 PWM

Residues
200 aa
Domains
PF13894 · C2H2-type zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5EI9, 5V3J, 5V3M, 5WJQ
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
12 active PDB models 6 summary rows
Region 180-3796 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_A0AAQ5BIH9_A0AAQ5BIH9_HUMAN:319:364_1llm_C_1 1llm 319-364 View model · PDB
Predicted = Low TFS_tr_A0AAQ5BIH9_A0AAQ5BIH9_HUMAN:180:379_5v3j_E_1 5v3j 180-379 View model · PDB
Predicted = Low TFS_tr_A0AAQ5BIH9_A0AAQ5BIH9_HUMAN:180:379_5v3m_C_1 5v3m 180-379 View model · PDB
Predicted = Low TFS_tr_A0AAQ5BIH9_A0AAQ5BIH9_HUMAN:182:286_5ei9_E_1 5ei9 182-286 View model · PDB
Predicted = Low TFS_tr_A0AAQ5BIH9_A0AAQ5BIH9_HUMAN:182:369_5wjq_D_1 5wjq 182-369 View model · PDB
Predicted = Low TFS_tr_A0AAQ5BIH9_A0AAQ5BIH9_HUMAN:189:340_2i13_A_1 2i13 189-340 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1llm 176:379 319,319 364,364 P:C,D · DNA:A,B 45.7% / 60.9% 52,54 View · PDB DIMER_tr_A0AAQ5BIH9_A0AAQ5BIH9_HUMAN:319:364_1llm_C_1
5 5ei9 176:379 182 286 P:E · DNA:A,B 41.0% / 55.2% 94 View · PDB TFS_tr_A0AAQ5BIH9_A0AAQ5BIH9_HUMAN:182:286_5ei9_E_1
4 2i13 176:379 189 340 P:A · DNA:C,D 37.4% / 51.0% 98 View · PDB TFS_tr_A0AAQ5BIH9_A0AAQ5BIH9_HUMAN:189:340_2i13_A_1
1 5wjq 176:379 182 369 P:D · DNA:A,B 35.6% / 53.4% 66 View · PDB TFS_tr_A0AAQ5BIH9_A0AAQ5BIH9_HUMAN:182:369_5wjq_D_1
2 5v3m 176:379 180 379 P:C · DNA:A,B 34.5% / 53.7% 71 View · PDB TFS_tr_A0AAQ5BIH9_A0AAQ5BIH9_HUMAN:180:379_5v3m_C_1
3 5v3j 176:379 180 379 P:E · DNA:A,B 34.5% / 53.7% 71 View · PDB TFS_tr_A0AAQ5BIH9_A0AAQ5BIH9_HUMAN:180:379_5v3j_E_1
Full sequence / unlocalized models6 models
SourceModelTemplateResidues modeledActions
Predicted = Lowa0aaq5bih9.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0aaq5bih9.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0aaq5bih9.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0aaq5bih9.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0aaq5bih9.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0aaq5bih9.af3.5-Full sequence / not localizedView model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
27-68PF01352KRAB boxNo overlap with loaded model regions
181-202PF13894C2H2-type zinc fingeroverlaps 180-379
319-340PF00096Zinc finger, C2H2 typeoverlaps 180-379
346-368PF00096Zinc finger, C2H2 typeoverlaps 180-379