ModCRE DB

Transcription factor

A0AAU7P1G8 - FOXC1

Forkhead box protein C1

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 553 aa

51 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)9
MotifPredictionSourceDNA bindingSupportLogoActions
MA0032.1 NN 70+% JASPAR GGTAAGTA 99.8% identity Open · Scan
M01982_2.00 NN 70+% CisBP TATGTAAACA 91.8% identity Open · Scan
M03034_2.00 NN 70+% CisBP GTAAACA 83.0% identity Open · Scan
M10571_2.00 NN 70+% CisBP AAAAATAAATATAAGG 82.4% identity Open · Scan
M00164_2.00 NN 70+% CisBP AATGTAAACA 77.0% identity Open · Scan
MA0033.1 NN 70+% JASPAR TATACATA 76.0% identity Open · Scan
M01990_2.00 NN 70+% CisBP TTGTTTACA 72.8% identity Open · Scan
MA0148.1 NN 70+% JASPAR TGTTTACTTTG 72.4% identity Open · Scan
M01974_2.00 NN 70+% CisBP GTAAACAA 70.5% identity Open · Scan
Nearest Neighbor (70% - 40%)42
MotifPredictionSourceDNA bindingSupportLogoActions
M03735_2.00 NN 70-40% CisBP AAACAATAATATT 69.8% identity Open · Scan
M09104_2.00 NN 70-40% CisBP CCTTGTTTACTTT 69.4% identity Open · Scan
MA0041.1 NN 70-40% JASPAR GAATGTTTGTTT 69.3% identity Open · Scan
MA1683.1 NN 70-40% JASPAR ATGTAAACATA 68.2% identity Open · Scan
M03741_2.00 NN 70-40% CisBP TTATGTAAACAAT 67.3% identity Open · Scan
M10570_2.00 NN 70-40% CisBP CTTAAGTAAACAATGG 67.3% identity Open · Scan
MA0031.1 NN 70-40% JASPAR GTAAACAT 67.3% identity Open · Scan
MA1487.1 NN 70-40% JASPAR CCTTAAATAAACAAT 67.3% identity Open · Scan
M00791_2.00 NN 70-40% CisBP ATGTAAACAA 65.6% identity Open · Scan
MA0613.1 NN 70-40% JASPAR GTAAACAA 65.6% identity Open · Scan
M01983_2.00 NN 70-40% CisBP TGTTTACATA 65.3% identity Open · Scan
MA0845.1 NN 70-40% JASPAR TATGTAAATAT 65.3% identity Open · Scan
M03046_2.00 NN 70-40% CisBP GTAAACAA 64.1% identity Open · Scan
MA0047.2 NN 70-40% JASPAR TGTTTACTTAGG 64.1% identity Open · Scan
MA0047.3 NN 70-40% JASPAR ATGTAAACATA 64.1% identity Open · Scan
MA0851.1 NN 70-40% JASPAR AAAAAGTAAACAAACAC 64.1% identity Open · Scan
MA0030.1 NN 70-40% JASPAR CAAACGTAAACAAT 64.0% identity Open · Scan
MA1606.1 NN 70-40% JASPAR ATGTAAACAAA 64.0% identity Open · Scan
M03058_2.00 NN 70-40% CisBP GTAAACATAAACA 63.3% identity Open · Scan
M03743_2.00 NN 70-40% CisBP TATGTAAATATTTACATA 63.2% identity Open · Scan
MA0047.1 NN 70-40% JASPAR CAATATTTACTT 63.2% identity Open · Scan
M10565_2.00 NN 70-40% CisBP AAACAAACAATC 61.6% identity Open · Scan
M04848_2.00 NN 70-40% CisBP AACGTCAACAC 61.3% identity Open · Scan
M10528_2.00 NN 70-40% CisBP ATAATAATATTTTT 60.9% identity Open · Scan
MA0614.1 NN 70-40% JASPAR GTAAACAA 60.9% identity Open · Scan
MA1607.1 NN 70-40% JASPAR AATATGTAAACAAA 60.9% identity Open · Scan
M01987_2.00 NN 70-40% CisBP GTAAACAAA 60.7% identity Open · Scan
MA0847.1 NN 70-40% JASPAR GTAAACA 59.5% identity Open · Scan
M00665_2.00 NN 70-40% CisBP ATGTAAACAAA 59.2% identity Open · Scan
MA0042.1 NN 70-40% JASPAR GGATGTTTGTTT 58.6% identity Open · Scan
M09669_2.00 NN 70-40% CisBP ATGTAAACACACC 58.5% identity Open · Scan
M04827_2.00 NN 70-40% CisBP GTAATGTAAACAA 57.3% identity Open · Scan
MA1103.1 NN 70-40% JASPAR ATGTAAACAAG 56.4% identity Open · Scan
M01002_2.00 NN 70-40% CisBP TAAACAA 55.6% identity Open · Scan
M01016_2.00 NN 70-40% CisBP TGGACGCTAA 55.5% identity Open · Scan
MA0852.1 NN 70-40% JASPAR AAAATGTAAACAAACAG 53.4% identity Open · Scan
M01991_2.00 NN 70-40% CisBP ATTGTAAACAAA 53.0% identity Open · Scan
MA0852.2 NN 70-40% JASPAR AATGTAAACAAGGC 52.4% identity Open · Scan
M00664_2.00 NN 70-40% CisBP ATAAACAA 51.4% identity Open · Scan
M04835_2.00 NN 70-40% CisBP ACGCGTCGTTACGACGCGT 50.6% identity Open · Scan
M09093_2.00 NN 70-40% CisBP AAATAAACAATA 50.0% identity Open · Scan
MA0040.1 NN 70-40% JASPAR TATTGTTTATT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 553 aa
76-159

Region 76-159 0 PWM

Residues
84 aa
Domains
PF00250 · Forkhead domain
3D models
1 active PDB
Templates
2A07
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 76-1591 model
Actions
Predicted = Low DIMER_A0AAU7P1G8:76:159_2a07_K_1 2a07 76-159 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
78-163PF00250Forkhead domainoverlaps 76-159