ModCRE DB

Transcription factor

A0JLS9 - ZEB1

Zinc finger E-box-binding homeobox 1 (Transcription factor 8)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 1059 aa

43 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)4
MotifPredictionSourceDNA bindingSupportLogoActions
MA0103.2 NN 70+% JASPAR CCTCACCTG 99.9% identity Open · Scan
M07842_2.00 NN 70+% CisBP CTCACCTG 98.9% identity Open · Scan
MA0103.1 NN 70+% JASPAR CACCTG 87.7% identity Open · Scan
M05844_2.00 NN 70+% CisBP TCACCTGT 87.5% identity Open · Scan
Nearest Neighbor (70% - 40%)39
MotifPredictionSourceDNA bindingSupportLogoActions
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 57.7% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 56.7% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 55.8% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 54.4% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 53.7% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 53.7% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 53.7% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 53.6% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 53.3% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 53.2% identity Open · Scan
M08390_2.00 NN 70-40% CisBP GCTTTGTTGACTCAC 53.0% identity Open · Scan
M07706_2.00 NN 70-40% CisBP GTCTTTGAGAGGGCCCAGATGTTGGACTTA 52.9% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 52.2% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 52.2% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 52.1% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 51.5% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 51.5% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 51.4% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 51.4% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 51.3% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 51.3% identity Open · Scan
M10391_2.00 NN 70-40% CisBP TACCCCACATTTATTTA 50.9% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 50.7% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 50.7% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 50.7% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 50.7% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 50.6% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 50.6% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 50.6% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 50.6% identity Open · Scan
M01538_2.00 NN 70-40% CisBP GCCCCTGA 50.0% identity Open · Scan
M01883_2.00 NN 70-40% CisBP TGCCCCTGA 50.0% identity Open · Scan
M06112_2.00 NN 70-40% CisBP CTACTTTCACCGGGG 50.0% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 50.0% identity Open · Scan
M07680_2.00 NN 70-40% CisBP AACCCCAAC 50.0% identity Open · Scan
M07746_2.00 NN 70-40% CisBP CAGCTGGCGCCCAACATGGGTCCC 50.0% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 50.0% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 50.0% identity Open · Scan
M08540_2.00 NN 70-40% CisBP CCCCT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1059 aa
591-629

Region 591-629 0 PWM

Residues
39 aa
Domains
No overlapping PFAM annotation recorded
3D models
1 active PDB
Templates
1HF0
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 591-6291 model
Actions
Predicted = Low DIMER_A0JLS9:591:629_1hf0_B_1 1hf0 591-629 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
170-222PF05605Drought induced 19 protein (Di19), zinc-bindingNo overlap with loaded model regions
240-262PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
268-288PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
932-954PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
960-980PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions