Region 116-225 0 PWM
- Residues
- 110 aa
- Domains
- PF13465 · Zinc-finger double domain PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
- 3D models
- 1 active PDB
- Templates
- 5EGB
- Sources
- Structure model
Transcription factor
A0PJ55 - ZNF778
ZNF778 protein
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 260 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M08335_2.00 | Known | CisBP | AGTCGTTGTCTG | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
260 aa
116-225
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 116-2251 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_A0PJ55:116:225_5egb_A_1 | 5egb | 116-225 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 6-28 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 34-56 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 62-84 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 90-112 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 132-157 | PF13465 | Zinc-finger double domain | overlaps 116-225 |
| 174-196 | PF00096 | Zinc finger, C2H2 type | overlaps 116-225 |
| 202-224 | PF00096 | Zinc finger, C2H2 type | overlaps 116-225 |
| 230-251 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |