ModCRE DB

Transcription factor

A2RRD8 - ZNF320

Zinc finger protein 320

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 509 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known6
MotifPredictionSourceDNA bindingSupportLogoActions
M07667_2.00 Known CisBP CCGCACAGGCCCCCGGGCCCC Direct PWM Open · Scan
MA1976.1 Known JASPAR AGGGGGGCCCGGGGGCCTGTGCGAGGG Direct PWM Open · Scan
MA1976.2 Known JASPAR GGGGGGCCCGGGGGCCTGTG Direct PWM Open · Scan
M08362_2.00 Known CisBP CTCGCACAGGCCCCCGGGCCCCCC Direct PWM Open · Scan
M08936_2.00 Known CisBP CACTGGCCCCCTGGTCCCAC Direct PWM Open · Scan
ZN320_HUMAN.H11MO.0.C Known HOCOMOCO GTGGGACCAGGGGGCCAGTG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 509 aa
188-464

Region 188-464 0 PWM

Residues
277 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5V3J
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 188-4641 model
Actions
Predicted = Low TFS_A2RRD8:188:464_5v3j_E_1 5v3j 188-464 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
8-48PF01352KRAB boxNo overlap with loaded model regions
161-183PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
189-211PF00096Zinc finger, C2H2 typeoverlaps 188-464
217-239PF00096Zinc finger, C2H2 typeoverlaps 188-464
245-267PF00096Zinc finger, C2H2 typeoverlaps 188-464
273-295PF00096Zinc finger, C2H2 typeoverlaps 188-464
301-323PF00096Zinc finger, C2H2 typeoverlaps 188-464
329-351PF00096Zinc finger, C2H2 typeoverlaps 188-464
357-379PF00096Zinc finger, C2H2 typeoverlaps 188-464
385-407PF00096Zinc finger, C2H2 typeoverlaps 188-464
413-435PF00096Zinc finger, C2H2 typeoverlaps 188-464
441-463PF00096Zinc finger, C2H2 typeoverlaps 188-464
469-489PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions