Transcription factor

A2VDJ6 - ZNF568

ZNF568 protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 502 aa

76 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)72

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
M00939_2.00	NN 70-40%	CisBP	CCACCTCA	69.3% identity		Open · Scan
M08395_2.00	NN 70-40%	CisBP	GCTGCCTACTCTTCC	67.5% identity		Open · Scan
M00953_2.00	NN 70-40%	CisBP	ATCTATAT	67.0% identity		Open · Scan
M00960_2.00	NN 70-40%	CisBP	TGCATCCC	65.9% identity		Open · Scan
M08329_2.00	NN 70-40%	CisBP	GCTGCATAGTATTCC	65.3% identity		Open · Scan
MA1124.1	NN 70-40%	JASPAR	CATTCATTCATTC	64.0% identity		Open · Scan
M00944_2.00	NN 70-40%	CisBP	TCGCTATAA	63.6% identity		Open · Scan
M00955_2.00	NN 70-40%	CisBP	ACGTCCTCT	63.5% identity		Open · Scan
M02924_2.00	NN 70-40%	CisBP	AGTGTTAACAGAACACCT	62.8% identity		Open · Scan
M00943_2.00	NN 70-40%	CisBP	CCCGCTGC	62.5% identity		Open · Scan
M00952_2.00	NN 70-40%	CisBP	GGATGCTC	62.5% identity		Open · Scan
M04653_2.00	NN 70-40%	CisBP	GGTACGGTTGTCCATGTTGCAA	62.5% identity		Open · Scan
M00958_2.00	NN 70-40%	CisBP	CGGCATCCC	62.3% identity		Open · Scan
M00959_2.00	NN 70-40%	CisBP	GCCCTCCC	62.3% identity		Open · Scan
M00782_2.00	NN 70-40%	CisBP	AGTGTGCGCTA	62.0% identity		Open · Scan
M08355_2.00	NN 70-40%	CisBP	GCGAACTCCTATTCATCC	62.0% identity		Open · Scan
M00950_2.00	NN 70-40%	CisBP	GCAGCCCA	61.3% identity		Open · Scan
M08325_2.00	NN 70-40%	CisBP	TTTTTTTTT	61.1% identity		Open · Scan
M07581_2.00	NN 70-40%	CisBP	TCCCCTGTGCTTCTCTCCCCT	60.9% identity		Open · Scan
M00948_2.00	NN 70-40%	CisBP	GCAGCACC	60.2% identity		Open · Scan
M08334_2.00	NN 70-40%	CisBP	TTTGTTTTTTTCTGATTGCTTTTTACTTAT	60.2% identity		Open · Scan
M04650_2.00	NN 70-40%	CisBP	GCATAACTGCCCCGCTGCC	60.1% identity		Open · Scan
M04611_2.00	NN 70-40%	CisBP	CTTTCGGACAC	60.0% identity		Open · Scan
M04613_2.00	NN 70-40%	CisBP	CTCATGTGCTAATTACAAA	59.4% identity		Open · Scan
M04465_2.00	NN 70-40%	CisBP	GTGATTCTTATCTTATCCTT	59.2% identity		Open · Scan
M08985_2.00	NN 70-40%	CisBP	TGAGGACCTACTGTGTGCC	58.5% identity		Open · Scan
M04598_2.00	NN 70-40%	CisBP	CGCTAACTCTCCACA	58.2% identity		Open · Scan
M00945_2.00	NN 70-40%	CisBP	CACCGCAC	57.7% identity		Open · Scan
M07649_2.00	NN 70-40%	CisBP	CCCCCCCCCCCCTCAGGAATGCC	57.7% identity		Open · Scan
M08247_2.00	NN 70-40%	CisBP	AAAAATAACAAACGG	57.7% identity		Open · Scan
M08267_2.00	NN 70-40%	CisBP	CAGTTTCATTTTCC	57.7% identity		Open · Scan
M07660_2.00	NN 70-40%	CisBP	CCGCGCCTACCTGAGGGCGCGGGCCTGGGG	57.5% identity		Open · Scan
M08392_2.00	NN 70-40%	CisBP	CTTCACCTGCTGAGG	56.8% identity		Open · Scan
M04387_2.00	NN 70-40%	CisBP	CGTGCTCCCC	56.6% identity		Open · Scan
M07610_2.00	NN 70-40%	CisBP	CCTTCTTCCTCCCCCCTGCCCACC	56.4% identity		Open · Scan
M08314_2.00	NN 70-40%	CisBP	ATTCATCAAGGTCCTCAACAATGG	56.3% identity		Open · Scan
M08335_2.00	NN 70-40%	CisBP	AGTCGTTGTCTG	56.3% identity		Open · Scan
M07712_2.00	NN 70-40%	CisBP	ACATTTTTTTAATCTAAAAAAACATTTACA	55.3% identity		Open · Scan
M07648_2.00	NN 70-40%	CisBP	GCTTGCAAAAAAAATTTAACTCCCAGCTC	55.2% identity		Open · Scan
M08254_2.00	NN 70-40%	CisBP	CTGCCCTGGGACTTT	55.0% identity		Open · Scan
M01474_2.00	NN 70-40%	CisBP	CGCCGATCAC	54.9% identity		Open · Scan
M07746_2.00	NN 70-40%	CisBP	CAGCTGGCGCCCAACATGGGTCCC	54.9% identity		Open · Scan
M08234_2.00	NN 70-40%	CisBP	GTCAACTTGACTGGGCCA	54.9% identity		Open · Scan
M00142_2.00	NN 70-40%	CisBP	GTGCTCCT	54.5% identity		Open · Scan
M04536_2.00	NN 70-40%	CisBP	ACGTAACCCGATACC	54.4% identity		Open · Scan
M07717_2.00	NN 70-40%	CisBP	GGCTCCGCCCCC	54.4% identity		Open · Scan
M00609_2.00	NN 70-40%	CisBP	GGAAGCCCTA	54.1% identity		Open · Scan
M07659_2.00	NN 70-40%	CisBP	GTCTTCCAAGTAGCTGGTGTT	53.9% identity		Open · Scan
M07747_2.00	NN 70-40%	CisBP	TGGTCTATAAAGGGCCTGGTT	53.8% identity		Open · Scan
M08901_2.00	NN 70-40%	CisBP	CCAGTTCACACC	53.5% identity		Open · Scan
M00786_2.00	NN 70-40%	CisBP	TATATATAT	53.1% identity		Open · Scan
M07578_2.00	NN 70-40%	CisBP	CAACTCTCC	52.9% identity		Open · Scan
MA1602.1	NN 70-40%	JASPAR	CGTCTACACGGG	52.8% identity		Open · Scan
M04621_2.00	NN 70-40%	CisBP	AGCAATTCCGCTCA	52.7% identity		Open · Scan
MA1656.1	NN 70-40%	JASPAR	CCAAGCCCAACCAG	52.7% identity		Open · Scan
M07588_2.00	NN 70-40%	CisBP	TCCTTCCCTCTTTCC	52.5% identity		Open · Scan
MA1154.1	NN 70-40%	JASPAR	CTTTCCCACAACACGAC	52.5% identity		Open · Scan
M08357_2.00	NN 70-40%	CisBP	GAGCCTGCTACTGAGCCTGGG	52.3% identity		Open · Scan
M00764_2.00	NN 70-40%	CisBP	GTCTACAC	52.1% identity		Open · Scan
M07678_2.00	NN 70-40%	CisBP	CCCGCCCCCTCCTCCCCCTTCCCACCC	52.1% identity		Open · Scan
M07562_2.00	NN 70-40%	CisBP	GAAAAAAAC	52.0% identity		Open · Scan
M04590_2.00	NN 70-40%	CisBP	TGCGCTAACCATTGC	51.9% identity		Open · Scan
M07587_2.00	NN 70-40%	CisBP	CCCCCTCCCCAGTCGAGCCCCCGC	51.9% identity		Open · Scan
M07753_2.00	NN 70-40%	CisBP	TGCATTCCTTGGCTTGTG	51.5% identity		Open · Scan
M08375_2.00	NN 70-40%	CisBP	TTCCCCATTGGCTACTGCACCGGTCCT	51.2% identity		Open · Scan
M08373_2.00	NN 70-40%	CisBP	CCCCCTGGCTCTTCCTCT	51.0% identity		Open · Scan
M01456_2.00	NN 70-40%	CisBP	GTGATCGGCG	50.9% identity		Open · Scan
M08274_2.00	NN 70-40%	CisBP	TTACTTGCAGCCCAACGCATTCCTAAC	50.8% identity		Open · Scan
MA0528.1	NN 70-40%	JASPAR	GGAGGAGGAGGGGGAGGAGGA	50.7% identity		Open · Scan
M08367_2.00	NN 70-40%	CisBP	GGGGTGATGACCACTCTGGCTTCTTAC	50.3% identity		Open · Scan
M07689_2.00	NN 70-40%	CisBP	ACCCAGGCTCCTTCCATCTTGTGGCTC	50.1% identity		Open · Scan
M10303_2.00	NN 70-40%	CisBP	TACTGGGAATACC	50.0% identity		Open · Scan

ModCRE4

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
TFS_tr_A2VDJ6_A2VDJ6_HUMAN:220:496_5v3j_E_1	ModCRE	Homology model	CCCCCGGCTCCTCTCACAGATACTGT	Region 220-496 · 1 3D model		Open · Scan
TFS_tr_A2VDJ6_A2VDJ6_HUMAN:220:496_5v3m_C_1	ModCRE	Homology model	CCGGCGGGGGGGGCGGGCCCTGAAGG	Region 220-496 · 1 3D model		Open · Scan
TFS_tr_A2VDJ6_A2VDJ6_HUMAN:220:496_5wjq_D_1	ModCRE	Homology model	GGCGGGGCGGGGGGGCGGGTGTGTACCC	Region 220-496 · 1 3D model		Open · Scan
TFS_tr_A2VDJ6_A2VDJ6_HUMAN:230:383_2i13_A_1	ModCRE	Homology model	TTTTAGAGGCAGCTGCGCCCC	Region 230-383 · 1 3D model		Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 502 aa

220-502

Region 220-502 4 PWM

Residues

283 aa

Domains

PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type

3D models

6 active PDBs · 6 summary rows

Templates

1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M

Sources

Predicted = Low

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

6 active PDB models 6 summary rows

Region 220-5026 models · 6 summary rows

Source ↕	Model ↕	Template ↕	Residues modeled ↕	Actions
Predicted = Low	DIMER_tr_A2VDJ6_A2VDJ6_HUMAN:247:298_1llm_D_1	1llm	247-298	View model · PDB
Predicted = Low	TFS_tr_A2VDJ6_A2VDJ6_HUMAN:220:496_5v3j_E_1	5v3j	220-496	View model · PDB
Predicted = Low	TFS_tr_A2VDJ6_A2VDJ6_HUMAN:220:496_5v3m_C_1	5v3m	220-496	View model · PDB
Predicted = Low	TFS_tr_A2VDJ6_A2VDJ6_HUMAN:220:496_5wjq_D_1	5wjq	220-496	View model · PDB
Predicted = Low	TFS_tr_A2VDJ6_A2VDJ6_HUMAN:230:383_2i13_A_1	2i13	230-383	View model · PDB
Predicted = Low	TFS_tr_A2VDJ6_A2VDJ6_HUMAN:249:502_7w1m_H_1	7w1m	249-502	View model · PDB

Model-summary evidence imported for this region.

Rank	Template	Domain	N-tails	C-tails	Chains	Identity / similarity	Coverage	Model file
4	2i13	215:502	230	383	P:A · DNA:C,D	59.1% / 74.7%	100	View · PDB TFS_tr_A2VDJ6_A2VDJ6_HUMAN:230:383_2i13_A_1
1	5wjq	215:502	220	496	P:D · DNA:A,B	54.5% / 69.3%	98	View · PDB TFS_tr_A2VDJ6_A2VDJ6_HUMAN:220:496_5wjq_D_1
2	5v3m	215:502	220	496	P:C · DNA:A,B	50.5% / 67.1%	100	View · PDB TFS_tr_A2VDJ6_A2VDJ6_HUMAN:220:496_5v3m_C_1
3	5v3j	215:502	220	496	P:E · DNA:A,B	50.5% / 67.1%	100	View · PDB TFS_tr_A2VDJ6_A2VDJ6_HUMAN:220:496_5v3j_E_1
1	1llm	215:502	247,247	298,298	P:C,D · DNA:A,B	44.2% / 65.4%	59,61	View · PDB DIMER_tr_A2VDJ6_A2VDJ6_HUMAN:247:298_1llm_D_1
5	7w1m	215:502	249	502	P:H · DNA:F,G	37.8% / 54.8%	78	View · PDB TFS_tr_A2VDJ6_A2VDJ6_HUMAN:249:502_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
48-88	PF01352	KRAB box	No overlap with loaded model regions
221-243	PF00096	Zinc finger, C2H2 type	overlaps 220-502
249-271	PF00096	Zinc finger, C2H2 type	overlaps 220-502
277-299	PF00096	Zinc finger, C2H2 type	overlaps 220-502
305-327	PF00096	Zinc finger, C2H2 type	overlaps 220-502
333-355	PF00096	Zinc finger, C2H2 type	overlaps 220-502
361-383	PF00096	Zinc finger, C2H2 type	overlaps 220-502
389-411	PF00096	Zinc finger, C2H2 type	overlaps 220-502
417-439	PF00096	Zinc finger, C2H2 type	overlaps 220-502
445-467	PF00096	Zinc finger, C2H2 type	overlaps 220-502
473-495	PF00096	Zinc finger, C2H2 type	overlaps 220-502