Transcription factor

A5PL18 - BCL6

B-cell CLL/lymphoma 6

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 706 aa

11 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
MA0463.2	NN 70+%	JASPAR	ATGCTTTCGAGGAATT	99.8% identity		Open · Scan
MA0463.1	NN 70+%	JASPAR	TTTCCTAGAAAGCA	94.4% identity		Open · Scan

Nearest Neighbor (70% - 40%)9

Motif	Prediction	Source	DNA binding	Support	Actions
M00944_2.00	NN 70-40%	CisBP	TCGCTATAA	54.1% identity	Open · Scan
M00959_2.00	NN 70-40%	CisBP	GCCCTCCC	54.1% identity	Open · Scan
M00943_2.00	NN 70-40%	CisBP	CCCGCTGC	52.3% identity	Open · Scan
M00955_2.00	NN 70-40%	CisBP	ACGTCCTCT	52.3% identity	Open · Scan
M08252_2.00	NN 70-40%	CisBP	CCGGCTCCAGCACCC	52.0% identity	Open · Scan
M00950_2.00	NN 70-40%	CisBP	GCAGCCCA	50.0% identity	Open · Scan
M00953_2.00	NN 70-40%	CisBP	ATCTATAT	50.0% identity	Open · Scan
M00960_2.00	NN 70-40%	CisBP	TGCATCCC	50.0% identity	Open · Scan
M01181_2.00	NN 70-40%	CisBP	GCGCATCCCC	50.0% identity	Open · Scan

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 706 aa

518-676

Residues: 159 aa
Domains: PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models: 1 active PDB
Templates: 5V3J
Sources: Structure model

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 518-6761 model

				Actions
Predicted = Low	TFS_A5PL18:518:676_5v3j_E_1	5v3j	518-676	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
22-128	PF00651	BTB/POZ domain	No overlap with loaded model regions
546-568	PF00096	Zinc finger, C2H2 type	overlaps 518-676
574-596	PF00096	Zinc finger, C2H2 type	overlaps 518-676
602-624	PF00096	Zinc finger, C2H2 type	overlaps 518-676
630-652	PF00096	Zinc finger, C2H2 type	overlaps 518-676