ModCRE DB

Transcription factor

A6H901 - FOXN4

FOXN4 protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 517 aa

12 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M01011_2.00 NN 70+% CisBP AAGGACGCGA 79.8% identity Open · Scan
Nearest Neighbor (70% - 40%)11
MotifPredictionSourceDNA bindingSupportLogoActions
M01227_2.00 NN 70-40% CisBP GTAAACAA 62.0% identity Open · Scan
MA1489.1 NN 70-40% JASPAR GTAAACAA 62.0% identity Open · Scan
M03745_2.00 NN 70-40% CisBP ATGTAAACAAA 61.8% identity Open · Scan
M04835_2.00 NN 70-40% CisBP ACGCGTCGTTACGACGCGT 60.7% identity Open · Scan
M03058_2.00 NN 70-40% CisBP GTAAACATAAACA 54.8% identity Open · Scan
M01016_2.00 NN 70-40% CisBP TGGACGCTAA 54.4% identity Open · Scan
MA0030.1 NN 70-40% JASPAR CAAACGTAAACAAT 50.6% identity Open · Scan
MA1606.1 NN 70-40% JASPAR ATGTAAACAAA 50.6% identity Open · Scan
M04827_2.00 NN 70-40% CisBP GTAATGTAAACAA 50.0% identity Open · Scan
M09093_2.00 NN 70-40% CisBP AAATAAACAATA 50.0% identity Open · Scan
MA0040.1 NN 70-40% JASPAR TATTGTTTATT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 517 aa
193-251

Region 193-251 0 PWM

Residues
59 aa
Domains
PF00250 · Forkhead domain
3D models
1 active PDB
Templates
3G73
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 193-2511 model
Actions
Predicted = Low DIMER_A6H901:193:251_3g73_A_1 3g73 193-251 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
193-277PF00250Forkhead domainoverlaps 193-251