Region 239-392 0 PWM
- Residues
- 154 aa
- Domains
- PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
- 3D models
- 1 active PDB
- Templates
- 2I13
- Sources
- Structure model
Transcription factor
A6NHJ4 - ZNF860
Zinc finger protein 860
Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 632 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M07723_2.00 | Known | CisBP | CCGCTGCTCCCTGCT | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
632 aa
239-392
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 239-3921 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_A6NHJ4:239:392_2i13_A_1 | 2i13 | 239-392 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 24-64 | PF01352 | KRAB box | No overlap with loaded model regions |
| 286-308 | PF00096 | Zinc finger, C2H2 type | overlaps 239-392 |
| 314-336 | PF00096 | Zinc finger, C2H2 type | overlaps 239-392 |
| 342-364 | PF00096 | Zinc finger, C2H2 type | overlaps 239-392 |
| 370-392 | PF00096 | Zinc finger, C2H2 type | overlaps 239-392 |
| 398-420 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 426-448 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 454-476 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 482-504 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 510-532 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 538-560 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 594-616 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |