ModCRE DB

Transcription factor

A6NK75 - ZNF98

Zinc finger protein 98 (Zinc finger protein 739) (Zinc finger protein F7175)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 572 aa

78 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M08380_2.00 Known CisBP TTGCCTTTTTGTTGTCCTTTT Direct PWM Open · Scan
Nearest Neighbor (>70%)4
MotifPredictionSourceDNA bindingSupportLogoActions
M00955_2.00 NN 70+% CisBP ACGTCCTCT 81.1% identity Open · Scan
M07715_2.00 NN 70+% CisBP CCGCCGCCGCCGTGG 76.3% identity Open · Scan
M07687_2.00 NN 70+% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 71.1% identity Open · Scan
M08381_2.00 NN 70+% CisBP ACATTTTGTCCTCCTAGTCCT 70.2% identity Open · Scan
Nearest Neighbor (70% - 40%)73
MotifPredictionSourceDNA bindingSupportLogoActions
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 69.8% identity Open · Scan
M08921_2.00 NN 70-40% CisBP CCTCATTCTTCTTGGACATG 69.2% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 66.2% identity Open · Scan
M07565_2.00 NN 70-40% CisBP CCTCTGGGGGCTCGTCCA 66.1% identity Open · Scan
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 66.1% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 65.6% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 65.2% identity Open · Scan
M07575_2.00 NN 70-40% CisBP TCTCCAAGGCGGCCAGCA 65.1% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 64.7% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 64.7% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 64.7% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 63.5% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 63.5% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 62.3% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 61.8% identity Open · Scan
MA1599.1 NN 70-40% JASPAR CGGGCCAAGCCCCTAT 61.8% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 61.1% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 61.1% identity Open · Scan
M07586_2.00 NN 70-40% CisBP GGGACCCGGGTGGGGGCGTCCCCC 61.1% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 61.0% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 60.9% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 60.1% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 60.0% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 60.0% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 59.7% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 59.1% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 58.6% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 58.5% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 58.4% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 58.1% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 57.5% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 57.2% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 57.0% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 56.6% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 56.4% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 56.3% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 56.3% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 56.1% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 55.0% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 54.7% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 54.2% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 54.2% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 54.2% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 54.1% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 54.1% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 54.1% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 53.9% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 53.7% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 53.6% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 53.4% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 53.4% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 53.3% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 53.0% identity Open · Scan
M08263_2.00 NN 70-40% CisBP ATCTCGGCACTTTGGGAGGCCA 52.9% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 52.8% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 52.7% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 52.5% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 52.4% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 52.3% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 52.2% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 52.2% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 52.0% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 51.7% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 51.3% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 51.1% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 51.0% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 50.8% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 50.7% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 50.7% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 50.1% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 50.0% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 50.0% identity Open · Scan
M10391_2.00 NN 70-40% CisBP TACCCCACATTTATTTA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 572 aa
207-316

Region 207-316 0 PWM

Residues
110 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5EGB
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 207-3161 model
Actions
Predicted = Low TFS_A6NK75:207:316_5egb_A_1 5egb 207-316 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
13-53PF01352KRAB boxNo overlap with loaded model regions
182-204PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
210-232PF00096Zinc finger, C2H2 typeoverlaps 207-316
238-260PF00096Zinc finger, C2H2 typeoverlaps 207-316
266-288PF00096Zinc finger, C2H2 typeoverlaps 207-316
294-316PF00096Zinc finger, C2H2 typeoverlaps 207-316
322-344PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
350-372PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
378-400PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
406-428PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
434-456PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
462-484PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
490-512PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
518-540PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions