ModCRE DB

Transcription factor

A6NLW8 - DUXA

Double homeobox protein A

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 204 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known6
MotifPredictionSourceDNA bindingSupportLogoActions
MA0884.1 Known JASPAR CTAATTTAATCAA Direct PWM Open · Scan
MA0884.2 Known JASPAR TTGATTTAATCAA Direct PWM Open · Scan
M01247_2.00 Known CisBP TTGATTGAT Direct PWM Open · Scan
M03244_2.00 Known CisBP CTAATTTAATCAA Direct PWM Open · Scan
M05402_2.00 Known CisBP TAATCTAATCA Direct PWM Open · Scan
M05403_2.00 Known CisBP TAATTTAATCA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 204 aa
101-155

Region 101-155 0 PWM

Residues
55 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
5HOD
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 101-1551 model
Actions
Predicted = Low DIMER_A6NLW8:101:155_5hod_A_1 5hod 101-155 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
16-70PF00046HomeodomainNo overlap with loaded model regions
102-155PF00046Homeodomainoverlaps 101-155