ModCRE DB

Transcription factor

A6NNF4 - ZNF726

Zinc finger protein 726

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 616 aa

81 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
M00955_2.00 NN 70+% CisBP ACGTCCTCT 77.6% identity Open · Scan
M07715_2.00 NN 70+% CisBP CCGCCGCCGCCGTGG 72.5% identity Open · Scan
Nearest Neighbor (70% - 40%)79
MotifPredictionSourceDNA bindingSupportLogoActions
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 69.6% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 67.9% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 67.6% identity Open · Scan
M08381_2.00 NN 70-40% CisBP ACATTTTGTCCTCCTAGTCCT 66.7% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 66.4% identity Open · Scan
M08921_2.00 NN 70-40% CisBP CCTCATTCTTCTTGGACATG 66.3% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 66.1% identity Open · Scan
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 65.9% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 65.8% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 65.8% identity Open · Scan
M07565_2.00 NN 70-40% CisBP CCTCTGGGGGCTCGTCCA 65.2% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 64.8% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 64.7% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 64.7% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 64.7% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 64.7% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 63.5% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 63.5% identity Open · Scan
M07586_2.00 NN 70-40% CisBP GGGACCCGGGTGGGGGCGTCCCCC 63.2% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 62.3% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 62.3% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 62.3% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 60.0% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 60.0% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 59.8% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 58.9% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 58.9% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 58.6% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 58.6% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 58.6% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 58.5% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 58.3% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 58.2% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 58.2% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 57.9% identity Open · Scan
MA1599.1 NN 70-40% JASPAR CGGGCCAAGCCCCTAT 57.9% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 57.7% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 57.3% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 56.6% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 55.9% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 55.8% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 55.8% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 55.1% identity Open · Scan
M07733_2.00 NN 70-40% CisBP TCTTTCTCTCTCTCC 55.0% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 55.0% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 54.9% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 54.5% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 54.3% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 54.0% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 53.8% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 53.6% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 53.5% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 53.3% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 53.3% identity Open · Scan
M02896_2.00 NN 70-40% CisBP TGCTTTCTAGGAATTCA 52.9% identity Open · Scan
MA0731.1 NN 70-40% JASPAR TGCTTTCTAGGAATTCA 52.9% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 52.1% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 52.1% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 52.0% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 52.0% identity Open · Scan
M03710_2.00 NN 70-40% CisBP CTCACGCCCCCC 51.8% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 51.8% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 51.8% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 51.7% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 51.5% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 51.4% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 51.2% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 51.1% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 51.0% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 51.0% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 50.9% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 50.9% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 50.8% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 50.7% identity Open · Scan
MA1592.1 NN 70-40% JASPAR GGTATGAGTTCTCGCT 50.6% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 50.3% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 50.1% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 50.0% identity Open · Scan
M07654_2.00 NN 70-40% CisBP TGCCCCCTGGTGGC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 616 aa
254-532

Region 254-532 0 PWM

Residues
279 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 254-5321 model
Actions
Predicted = Low TFS_A6NNF4:254:532_5wjq_D_1 5wjq 254-532 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
4-44PF01352KRAB boxNo overlap with loaded model regions
201-223PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
257-279PF00096Zinc finger, C2H2 typeoverlaps 254-532
285-307PF00096Zinc finger, C2H2 typeoverlaps 254-532
313-335PF00096Zinc finger, C2H2 typeoverlaps 254-532
341-363PF00096Zinc finger, C2H2 typeoverlaps 254-532
369-391PF00096Zinc finger, C2H2 typeoverlaps 254-532
397-419PF00096Zinc finger, C2H2 typeoverlaps 254-532
425-447PF00096Zinc finger, C2H2 typeoverlaps 254-532
453-475PF00096Zinc finger, C2H2 typeoverlaps 254-532
481-503PF00096Zinc finger, C2H2 typeoverlaps 254-532
509-531PF00096Zinc finger, C2H2 typeoverlaps 254-532
537-559PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
565-587PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
593-615PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions