ModCRE DB

Transcription factor

A7MD06 - ZNF483

Zinc finger protein 483

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 744 aa

101 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M07638_2.00 NN 70+% CisBP TGCAGCTCCCTGCCC 99.8% identity Open · Scan
Nearest Neighbor (70% - 40%)100
MotifPredictionSourceDNA bindingSupportLogoActions
M00943_2.00 NN 70-40% CisBP CCCGCTGC 68.2% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 67.0% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 67.0% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 65.8% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 65.8% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 65.8% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 64.7% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 64.7% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 64.7% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 63.5% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 63.5% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 63.0% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 62.5% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 61.6% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 61.1% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 60.9% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 60.1% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 59.9% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 59.8% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 58.7% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 58.7% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 58.5% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 58.5% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 58.5% identity Open · Scan
M07754_2.00 NN 70-40% CisBP CGCCCCCTCCCT 57.9% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 57.6% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 57.5% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 57.5% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 57.4% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 57.3% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 57.2% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 57.2% identity Open · Scan
MA0130.1 NN 70-40% JASPAR ATCCAC 56.4% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 56.3% identity Open · Scan
M07565_2.00 NN 70-40% CisBP CCTCTGGGGGCTCGTCCA 56.2% identity Open · Scan
M07656_2.00 NN 70-40% CisBP TGTCTAGTAAGTCTA 56.2% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 56.1% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 56.1% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 56.1% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 55.9% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 55.8% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 55.8% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 55.7% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 55.6% identity Open · Scan
M07715_2.00 NN 70-40% CisBP CCGCCGCCGCCGTGG 55.3% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 55.2% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 55.1% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 54.8% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 54.3% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 54.2% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 54.1% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 53.8% identity Open · Scan
M07691_2.00 NN 70-40% CisBP CCTGCAGCCACCTTGGCCTTG 53.5% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 53.5% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 53.3% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 53.2% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 53.2% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 53.2% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 53.2% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 53.1% identity Open · Scan
M07701_2.00 NN 70-40% CisBP CCTGGGCTAGGCCCTGGC 52.9% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 52.8% identity Open · Scan
M07586_2.00 NN 70-40% CisBP GGGACCCGGGTGGGGGCGTCCCCC 52.8% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 52.8% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 52.5% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 52.4% identity Open · Scan
M07628_2.00 NN 70-40% CisBP AGTGGTTCTGCTTCT 52.3% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 52.3% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 52.3% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 52.2% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 52.2% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 52.1% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 52.0% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 51.9% identity Open · Scan
M07607_2.00 NN 70-40% CisBP GGCTCCACG 51.9% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 51.7% identity Open · Scan
M07618_2.00 NN 70-40% CisBP CCTTTGGTGCTC 51.6% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 51.5% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 51.5% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 51.5% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 51.4% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 51.4% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 51.3% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 51.3% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 51.2% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 51.2% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 51.2% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 51.2% identity Open · Scan
M07746_2.00 NN 70-40% CisBP CAGCTGGCGCCCAACATGGGTCCC 51.1% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 51.1% identity Open · Scan
M00217_2.00 NN 70-40% CisBP TTACTCAATAT 51.0% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 51.0% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 50.7% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 50.5% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 50.4% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 50.4% identity Open · Scan
M07627_2.00 NN 70-40% CisBP CAGTCACCTTCTGG 50.3% identity Open · Scan
M04483_2.00 NN 70-40% CisBP ATGCACACACTGAAAAA 50.0% identity Open · Scan
M06169_2.00 NN 70-40% CisBP GCCACGCCCAAC 50.0% identity Open · Scan
MA1155.1 NN 70-40% JASPAR TGCACACACTGAAAA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 744 aa
436-714

Region 436-714 0 PWM

Residues
279 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 436-7141 model
Actions
Predicted = Low TFS_A7MD06:436:714_5wjq_D_1 5wjq 436-714 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
49-136PF02023SCAN domainNo overlap with loaded model regions
169-209PF01352KRAB boxNo overlap with loaded model regions
439-461PF00096Zinc finger, C2H2 typeoverlaps 436-714
467-489PF00096Zinc finger, C2H2 typeoverlaps 436-714
495-517PF00096Zinc finger, C2H2 typeoverlaps 436-714
523-545PF00096Zinc finger, C2H2 typeoverlaps 436-714
551-573PF00096Zinc finger, C2H2 typeoverlaps 436-714
579-601PF00096Zinc finger, C2H2 typeoverlaps 436-714
635-657PF00096Zinc finger, C2H2 typeoverlaps 436-714
663-685PF00096Zinc finger, C2H2 typeoverlaps 436-714
691-713PF00096Zinc finger, C2H2 typeoverlaps 436-714
719-741PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions