ModCRE DB

Transcription factor

A7YF73 - TSHZ1

TSHZ1 protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 722 aa

6 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_A7YF73_A7YF73_HUMAN:682:709_1llm_D_1 ModCRE Homology model AAACCGCGGAAA Region 682-709 · 1 3D model Open · Scan
TFS_tr_A7YF73_A7YF73_HUMAN:610:639_5eh2_F_1 ModCRE Homology model AACAGGTGCCCT Region 610-639 · 1 3D model Open · Scan
TFS_tr_A7YF73_A7YF73_HUMAN:615:639_6e93_A_1 ModCRE Homology model GTCCCCGTGG Region 615-639 · 1 3D model Open · Scan
TFS_tr_A7YF73_A7YF73_HUMAN:615:639_6e94_A_1 ModCRE Homology model AACCACGTGG Region 615-639 · 1 3D model Open · Scan
TFS_tr_A7YF73_A7YF73_HUMAN:615:640_4gzn_C_1 ModCRE Homology model CCGAGCGGA Region 615-640 · 1 3D model Open · Scan
TFS_tr_A7YF73_A7YF73_HUMAN:615:640_4m9v_C_1 ModCRE Homology model TCTTGGTGT Region 615-640 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 722 aa
610-640
682-709

Region 610-640 5 PWM

Residues
31 aa
Domains
No overlapping PFAM annotation recorded
3D models
5 active PDBs · 5 summary rows
Templates
4GZN, 4M9V, 5EH2, 6E93, 6E94
Sources
Predicted = Low
Scan this region Show models

Region 682-709 1 PWM

Residues
28 aa
Domains
No overlapping PFAM annotation recorded
3D models
1 active PDB · 1 summary row
Templates
1LLM
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 610-6405 models · 5 summary rows
Actions
Predicted = Low TFS_tr_A7YF73_A7YF73_HUMAN:610:639_5eh2_F_1 5eh2 610-639 View model · PDB
Predicted = Low TFS_tr_A7YF73_A7YF73_HUMAN:615:639_6e93_A_1 6e93 615-639 View model · PDB
Predicted = Low TFS_tr_A7YF73_A7YF73_HUMAN:615:639_6e94_A_1 6e94 615-639 View model · PDB
Predicted = Low TFS_tr_A7YF73_A7YF73_HUMAN:615:640_4gzn_C_1 4gzn 615-640 View model · PDB
Predicted = Low TFS_tr_A7YF73_A7YF73_HUMAN:615:640_4m9v_C_1 4m9v 615-640 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 4gzn 610:640 615 640 P:C · DNA:A,B 46.2% / 53.8% 44 View · PDB TFS_tr_A7YF73_A7YF73_HUMAN:615:640_4gzn_C_1
2 4m9v 610:640 615 640 P:C · DNA:A,B 46.2% / 53.8% 44 View · PDB TFS_tr_A7YF73_A7YF73_HUMAN:615:640_4m9v_C_1
3 6e93 610:640 615 639 P:A · DNA:C,D 40.0% / 56.0% 22 View · PDB TFS_tr_A7YF73_A7YF73_HUMAN:615:639_6e93_A_1
4 6e94 610:640 615 639 P:A · DNA:C,D 40.0% / 56.0% 22 View · PDB TFS_tr_A7YF73_A7YF73_HUMAN:615:639_6e94_A_1
5 5eh2 610:640 610 639 P:F · DNA:C,D 40.0% / 50.0% 27 View · PDB TFS_tr_A7YF73_A7YF73_HUMAN:610:639_5eh2_F_1
Region 682-7091 model · 1 summary row
Actions
Predicted = Low DIMER_tr_A7YF73_A7YF73_HUMAN:682:709_1llm_D_1 1llm 682-709 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1llm 610:640 682,682 709,709 P:C,D · DNA:A,B 32.1% / 53.6% 32,32 View · PDB DIMER_tr_A7YF73_A7YF73_HUMAN:682:709_1llm_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
538-602PF26094Teashirt homolog 3-like, homeodomainNo overlap with loaded model regions