ModCRE DB

Transcription factor

A8K251

Zinc finger and BTB domain-containing protein 20 (Zinc finger protein 288)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 668 aa

10 Generated PWM 11 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE10
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_A8K251_A8K251_HUMAN:501:611_2jp9_A_1 ModCRE Homology model GCCCGGGGGGGGAAAAT Region 501-611 · 1 3D model Open · Scan
TFS_tr_A8K251_A8K251_HUMAN:501:611_2jpa_A_1 ModCRE Homology model CTCCGGGGGGGGCT Region 501-611 · 1 3D model Open · Scan
TFS_tr_A8K251_A8K251_HUMAN:502:612_5egb_A_1 ModCRE Homology model CCGGAGAGTGGGGGACCC Region 502-612 · 1 3D model Open · Scan
TFS_tr_A8K251_A8K251_HUMAN:502:612_5ei9_E_1 ModCRE Homology model CCGGAGGGGGGGACCGC Region 502-612 · 1 3D model Open · Scan
TFS_tr_A8K251_A8K251_HUMAN:503:612_2i13_A_1 ModCRE Homology model ATATACCTACTACGCCTGCCC Region 503-612 · 1 3D model Open · Scan
TFS_tr_A8K251_A8K251_HUMAN:503:612_6ml4_A_1 ModCRE Homology model CATTTTTGACGGTGATGA Region 503-612 · 1 3D model Open · Scan
TFS_tr_A8K251_A8K251_HUMAN:503:612_6ml5_A_1 ModCRE Homology model GATTTTTGTAGCTGATGT Region 503-612 · 1 3D model Open · Scan
TFS_tr_A8K251_A8K251_HUMAN:503:612_6ml6_A_1 ModCRE Homology model GTTTTTTTTAAGGGATGA Region 503-612 · 1 3D model Open · Scan
TFS_tr_A8K251_A8K251_HUMAN:503:612_6ml7_A_1 ModCRE Homology model GATTTTTTTAGCTGATGA Region 503-612 · 1 3D model Open · Scan
TFS_tr_A8K251_A8K251_HUMAN:504:612_5eh2_F_1 ModCRE Homology model CCCCAGGGGGCGGGCATTC Region 504-612 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 668 aa
501-612

Region 501-612 10 PWM

Residues
112 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
11 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 2JP9, 2JPA, 5EGB, 5EH2, 5EI9, 6ML4, ...
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
11 active PDB models 6 summary rows
Region 501-61211 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_A8K251_A8K251_HUMAN:531:579_1llm_D_1 1llm 531-579 View model · PDB
Predicted = Low TFS_tr_A8K251_A8K251_HUMAN:501:611_2jp9_A_1 2jp9 501-611 View model · PDB
Predicted = Low TFS_tr_A8K251_A8K251_HUMAN:501:611_2jpa_A_1 2jpa 501-611 View model · PDB
Predicted = Low TFS_tr_A8K251_A8K251_HUMAN:502:612_5egb_A_1 5egb 502-612 View model · PDB
Predicted = Low TFS_tr_A8K251_A8K251_HUMAN:502:612_5ei9_E_1 5ei9 502-612 View model · PDB
Predicted = Low TFS_tr_A8K251_A8K251_HUMAN:503:612_2i13_A_1 2i13 503-612 View model · PDB
Predicted = Low TFS_tr_A8K251_A8K251_HUMAN:503:612_6ml4_A_1 6ml4 503-612 View model · PDB
Predicted = Low TFS_tr_A8K251_A8K251_HUMAN:503:612_6ml5_A_1 6ml5 503-612 View model · PDB
Predicted = Low TFS_tr_A8K251_A8K251_HUMAN:503:612_6ml6_A_1 6ml6 503-612 View model · PDB
Predicted = Low TFS_tr_A8K251_A8K251_HUMAN:503:612_6ml7_A_1 6ml7 503-612 View model · PDB
Predicted = Low TFS_tr_A8K251_A8K251_HUMAN:504:612_5eh2_F_1 5eh2 504-612 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
2 6ml5 501:615 503 612 P:A · DNA:E,F 46.4% / 56.4% 77 View · PDB TFS_tr_A8K251_A8K251_HUMAN:503:612_6ml5_A_1
3 6ml7 501:615 503 612 P:A · DNA:E,F 46.4% / 56.4% 76 View · PDB TFS_tr_A8K251_A8K251_HUMAN:503:612_6ml7_A_1
4 6ml6 501:615 503 612 P:A · DNA:E,F 46.4% / 56.4% 76 View · PDB TFS_tr_A8K251_A8K251_HUMAN:503:612_6ml6_A_1
5 6ml4 501:615 503 612 P:A · DNA:E,F 46.4% / 56.4% 76 View · PDB TFS_tr_A8K251_A8K251_HUMAN:503:612_6ml4_A_1
1 2i13 501:615 503 612 P:A · DNA:C,D 43.6% / 58.2% 72 View · PDB TFS_tr_A8K251_A8K251_HUMAN:503:612_2i13_A_1
1 1llm 501:615 531,531 579,579 P:C,D · DNA:A,B 42.9% / 59.2% 56,57 View · PDB DIMER_tr_A8K251_A8K251_HUMAN:531:579_1llm_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
21-122PF00651BTB/POZ domainNo overlap with loaded model regions
505-527PF00096Zinc finger, C2H2 typeoverlaps 501-612
533-555PF00096Zinc finger, C2H2 typeoverlaps 501-612
561-583PF00096Zinc finger, C2H2 typeoverlaps 501-612
589-611PF00096Zinc finger, C2H2 typeoverlaps 501-612
642-664PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions