ModCRE DB

Transcription factor

A8K350

Transcription factor Sp8

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 466 aa

75 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)10
MotifPredictionSourceDNA bindingSupportLogoActions
MA0747.1 NN 70+% JASPAR GCCACGCCCACT 91.4% identity Open · Scan
M05859_2.00 NN 70+% CisBP GGCCACGCCCACT 76.3% identity Open · Scan
MA0685.1 NN 70+% JASPAR TAAGCCACGCCCCCTTT 76.3% identity Open · Scan
MA0746.1 NN 70+% JASPAR GCCACGCCCCC 74.5% identity Open · Scan
M00765_2.00 NN 70+% CisBP CCCGCCCCC 73.6% identity Open · Scan
MA0079.1 NN 70+% JASPAR GGGGCGGGGT 71.8% identity Open · Scan
M00954_2.00 NN 70+% CisBP CTACCCTA 71.7% identity Open · Scan
M00777_2.00 NN 70+% CisBP ACCGTTAT 71.0% identity Open · Scan
MA1107.1 NN 70+% JASPAR GGCCACACCCACC 71.0% identity Open · Scan
M02903_2.00 NN 70+% CisBP ATGCCACGCCCCTTTTTG 70.1% identity Open · Scan
Nearest Neighbor (70% - 40%)65
MotifPredictionSourceDNA bindingSupportLogoActions
M04555_2.00 NN 70-40% CisBP GCCACGCCCCCGCCACGCCCAC 69.1% identity Open · Scan
MA1512.1 NN 70-40% JASPAR GCCACGCCCAC 69.1% identity Open · Scan
M08246_2.00 NN 70-40% CisBP GCCCCACCCA 68.6% identity Open · Scan
MA0740.1 NN 70-40% JASPAR GGCCACGCCCCCTT 68.6% identity Open · Scan
MA1511.1 NN 70-40% JASPAR GCCACACCCCC 68.6% identity Open · Scan
MA0516.1 NN 70-40% JASPAR GCCCCGCCCCCTCCC 67.2% identity Open · Scan
M00951_2.00 NN 70-40% CisBP GCTGCACG 67.0% identity Open · Scan
M06135_2.00 NN 70-40% CisBP CAGCCACGCCCACCT 65.4% identity Open · Scan
MA1513.1 NN 70-40% JASPAR GCCCCGCCCCC 65.4% identity Open · Scan
M06466_2.00 NN 70-40% CisBP TCCGCCCCCT 65.1% identity Open · Scan
MA0657.1 NN 70-40% JASPAR ATGCCACGCCCCTTTTTG 62.6% identity Open · Scan
MA1564.1 NN 70-40% JASPAR GCCACGCCCCCC 61.4% identity Open · Scan
MA0599.1 NN 70-40% JASPAR GCCCCGCCCC 60.6% identity Open · Scan
M00632_2.00 NN 70-40% CisBP ACACGCCCCT 60.3% identity Open · Scan
M00617_2.00 NN 70-40% CisBP CCACGCCCA 60.0% identity Open · Scan
M00647_2.00 NN 70-40% CisBP CCCCCCC 59.6% identity Open · Scan
M06169_2.00 NN 70-40% CisBP GCCACGCCCAAC 59.5% identity Open · Scan
M00224_2.00 NN 70-40% CisBP CCCGCCCC 59.0% identity Open · Scan
MA1517.1 NN 70-40% JASPAR GGCCACGCCCA 58.6% identity Open · Scan
MA1515.1 NN 70-40% JASPAR CACCACGCCCA 57.9% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 57.3% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 56.9% identity Open · Scan
M04463_2.00 NN 70-40% CisBP CACCACGCCCA 56.8% identity Open · Scan
M09008_2.00 NN 70-40% CisBP CCCGGCCCCACCCT 56.8% identity Open · Scan
MA0039.1 NN 70-40% JASPAR TAAAGGAAGG 56.8% identity Open · Scan
MA0039.3 NN 70-40% JASPAR CCACACCCTGC 56.8% identity Open · Scan
MA0493.1 NN 70-40% JASPAR GGCCACACCCA 56.8% identity Open · Scan
MA1516.1 NN 70-40% JASPAR GACCACGCCCA 56.8% identity Open · Scan
M06122_2.00 NN 70-40% CisBP GATACGCCCCCTAA 56.7% identity Open · Scan
M08525_2.00 NN 70-40% CisBP CCCCGCA 54.9% identity Open · Scan
M01538_2.00 NN 70-40% CisBP GCCCCTGA 54.7% identity Open · Scan
M04430_2.00 NN 70-40% CisBP GACCACGCCCA 54.5% identity Open · Scan
MA0742.1 NN 70-40% JASPAR GACCACGCCCTTATT 54.5% identity Open · Scan
M00249_2.00 NN 70-40% CisBP ACTCCCCCGCA 54.2% identity Open · Scan
M08968_2.00 NN 70-40% CisBP CCCCCCCTCCTCCCCCGCCC 54.2% identity Open · Scan
MA1627.1 NN 70-40% JASPAR CCCCTCCCCCACAC 54.2% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 53.7% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 53.5% identity Open · Scan
M00036_2.00 NN 70-40% CisBP TACCCCTT 52.6% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 52.5% identity Open · Scan
M03710_2.00 NN 70-40% CisBP CTCACGCCCCCC 52.5% identity Open · Scan
M08320_2.00 NN 70-40% CisBP TTCCCTGCC 52.2% identity Open · Scan
M01529_2.00 NN 70-40% CisBP CCCCGCATT 51.8% identity Open · Scan
M10303_2.00 NN 70-40% CisBP TACTGGGAATACC 51.4% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 51.3% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 51.2% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 51.2% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 51.2% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 51.2% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 51.2% identity Open · Scan
MA1651.1 NN 70-40% JASPAR GTTCCAAAATGGCTGCCTCCG 51.2% identity Open · Scan
M01041_2.00 NN 70-40% CisBP CCCCTATTT 51.0% identity Open · Scan
M01039_2.00 NN 70-40% CisBP CCCCCTA 50.8% identity Open · Scan
MA1508.1 NN 70-40% JASPAR GAAACAGGAAGT 50.7% identity Open · Scan
M01445_2.00 NN 70-40% CisBP ACACGCCGT 50.6% identity Open · Scan
M01035_2.00 NN 70-40% CisBP CCCCCTTAAT 50.0% identity Open · Scan
M01180_2.00 NN 70-40% CisBP ACCCCTGG 50.0% identity Open · Scan
M01436_2.00 NN 70-40% CisBP TACCCCTTA 50.0% identity Open · Scan
M01441_2.00 NN 70-40% CisBP CCCCTGAATT 50.0% identity Open · Scan
M01470_2.00 NN 70-40% CisBP CCCCCCGC 50.0% identity Open · Scan
M02731_2.00 NN 70-40% CisBP CACTTTCACTTT 50.0% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 50.0% identity Open · Scan
M03692_2.00 NN 70-40% CisBP TTCACTTTCACTT 50.0% identity Open · Scan
MA0508.1 NN 70-40% JASPAR AGAAAGTGAAAGTGA 50.0% identity Open · Scan
MA0741.1 NN 70-40% JASPAR GCCACGCCCCC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 466 aa
328-414

Region 328-414 0 PWM

Residues
87 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5KE9
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 328-4141 model
Actions
Predicted = Low TFS_A8K350:328:414_5ke9_A_1 5ke9 328-414 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
332-356PF00096Zinc finger, C2H2 typeoverlaps 328-414
362-386PF00096Zinc finger, C2H2 typeoverlaps 328-414
392-414PF00096Zinc finger, C2H2 typeoverlaps 328-414