Region 89-163 0 PWM
- Residues
- 75 aa
- Domains
- PF00105 · Double treble clef zinc finger, C4 type
- 3D models
- 1 active PDB
- Templates
- 1DSZ
- Sources
- Structure model
Transcription factor
A8K3H3 - RARG
Retinoic acid nuclear receptor gamma variant 1 (Retinoic acid receptor gamma) (Retinoic acid receptor, gamma, isoform CRA_b) (cDNA FLJ75202, highly similar to Homo sapiens, retinoic acid receptor, gamma)
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 454 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
454 aa
89-163
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 89-1631 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | DIMER_A8K3H3:89:163_1dsz_A_1 | 1dsz | 89-163 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 89-157 | PF00105 | Double treble clef zinc finger, C4 type | overlaps 89-163 |
| 228-398 | PF00104 | Ligand-binding domain of nuclear hormone receptor | No overlap with loaded model regions |