ModCRE DB

Transcription factor

A8K3H9

Transcription factor RelB

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 579 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3
MotifPredictionSourceDNA bindingSupportLogoActions
MA1117.1 NN 70+% JASPAR GAATTCCCCGG 99.8% identity Open · Scan
M02711_2.00 NN 70+% CisBP GGGAATTTCC 75.0% identity Open · Scan
M03448_2.00 NN 70+% CisBP AGGGGATTCCCCT 75.0% identity Open · Scan
Nearest Neighbor (70% - 40%)2
MotifPredictionSourceDNA bindingSupportLogoActions
M08038_2.00 NN 70-40% CisBP CTCTTCCTCCCTCCTCTTCTCCTCTCCTCT 52.9% identity Open · Scan
MA0101.1 NN 70-40% JASPAR GGGGATTTCC 50.3% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 579 aa
109-405

Region 109-405 0 PWM

Residues
297 aa
Domains
PF00554 · Rel homology DNA-binding domain PF16179 · Rel homology dimerisation domain PF16181 · RelB transactivation domain
3D models
1 active PDB
Templates
3DO7
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 109-4051 model
Actions
Predicted = Low DIMER_A8K3H9:109:405_3do7_A_1 3do7 109-405 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
18-102PF16180RelB leucine zipperNo overlap with loaded model regions
127-295PF00554Rel homology DNA-binding domainoverlaps 109-405
304-400PF16179Rel homology dimerisation domainoverlaps 109-405
403-579PF16181RelB transactivation domainoverlaps 109-405