ModCRE DB

Transcription factor

A8K433

Zinc finger protein 2 (Zinc finger protein 661)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 383 aa

116 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)110
MotifPredictionSourceDNA bindingSupportLogoActions
M00939_2.00 NN 70-40% CisBP CCACCTCA 67.0% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 64.5% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 62.0% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 61.3% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 61.1% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 60.9% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 60.2% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 60.0% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 59.8% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 59.8% identity Open · Scan
M08263_2.00 NN 70-40% CisBP ATCTCGGCACTTTGGGAGGCCA 59.7% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 59.5% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 59.4% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 59.2% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 59.2% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 59.2% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 59.0% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 58.8% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 58.8% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 58.8% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 58.8% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 58.8% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 58.8% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 58.8% identity Open · Scan
M08949_2.00 NN 70-40% CisBP TTCTATTTCTTCTTGTGTCA 58.6% identity Open · Scan
M04515_2.00 NN 70-40% CisBP TATGCTATAACAAGCAGCCCC 58.4% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 58.0% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 58.0% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 57.9% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 57.8% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 57.6% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 57.1% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 57.1% identity Open · Scan
MA0130.1 NN 70-40% JASPAR ATCCAC 57.1% identity Open · Scan
M00774_2.00 NN 70-40% CisBP TTAGTATACACAAGT 57.0% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 56.9% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 56.9% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 56.9% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 56.8% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 56.8% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 56.6% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 56.5% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 56.5% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 56.4% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 56.3% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 56.3% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 55.7% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 55.6% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 55.5% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 55.5% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 55.5% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 55.2% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 55.1% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 54.9% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 54.8% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 54.8% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 54.7% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 54.7% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 54.5% identity Open · Scan
M07693_2.00 NN 70-40% CisBP CTCCTGTGTGTGCCTTGGCTG 54.5% identity Open · Scan
M07740_2.00 NN 70-40% CisBP TCCTGATTCCACACTCAAACATAACTTT 54.4% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 54.3% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 54.3% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 54.1% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 54.0% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 54.0% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 53.7% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 53.7% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 53.6% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 53.6% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 53.5% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 53.4% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 53.4% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 53.4% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 53.2% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 53.1% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 53.1% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 53.0% identity Open · Scan
M07634_2.00 NN 70-40% CisBP AAACGTCCACG 52.9% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 52.8% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 52.8% identity Open · Scan
M08921_2.00 NN 70-40% CisBP CCTCATTCTTCTTGGACATG 52.8% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 52.7% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 52.7% identity Open · Scan
MA0056.1 NN 70-40% JASPAR TGGGGA 52.6% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 52.4% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 52.4% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 52.3% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 52.2% identity Open · Scan
M07746_2.00 NN 70-40% CisBP CAGCTGGCGCCCAACATGGGTCCC 52.2% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 52.1% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 52.0% identity Open · Scan
M07770_2.00 NN 70-40% CisBP CTTGGACTT 52.0% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 51.8% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 51.7% identity Open · Scan
M07565_2.00 NN 70-40% CisBP CCTCTGGGGGCTCGTCCA 51.2% identity Open · Scan
M07595_2.00 NN 70-40% CisBP GCCTGTTCCTCTCCC 51.2% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 51.1% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 51.0% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 50.7% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 50.4% identity Open · Scan
M07586_2.00 NN 70-40% CisBP GGGACCCGGGTGGGGGCGTCCCCC 50.2% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 50.1% identity Open · Scan
M08386_2.00 NN 70-40% CisBP GCCTTAAAAGCTCAGCAC 50.1% identity Open · Scan
M00019_2.00 NN 70-40% CisBP ACCCCTAATT 50.0% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 50.0% identity Open · Scan
M07662_2.00 NN 70-40% CisBP CCTGTGTCCTCCCTGGTCCCC 50.0% identity Open · Scan
M07688_2.00 NN 70-40% CisBP GAGCCCCAAGCA 50.0% identity Open · Scan
M07723_2.00 NN 70-40% CisBP CCGCTGCTCCCTGCT 50.0% identity Open · Scan
MA1580.1 NN 70-40% JASPAR TGTACAGTAT 50.0% identity Open · Scan
ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_A8K433_A8K433_HUMAN:325:374_1llm_D_1 ModCRE Homology model CCCGGCGCCGGA Region 325-374 · 1 3D model Open · Scan
TFS_tr_A8K433_A8K433_HUMAN:116:377_7w1m_H_1 ModCRE Homology model AAAAAGATGAAGCACCAACGGGGGCACGTCAAAGCGGCCCGA Region 116-377 · 1 3D model Open · Scan
TFS_tr_A8K433_A8K433_HUMAN:119:350_5v3j_E_1 ModCRE Homology model TCCCCGGGGGGGGGGGGCTGGGGGGG Region 119-350 · 1 3D model Open · Scan
TFS_tr_A8K433_A8K433_HUMAN:119:350_5v3m_C_1 ModCRE Homology model CCCCCGCGGTGGGCGCGCCGGGGGGG Region 119-350 · 1 3D model Open · Scan
TFS_tr_A8K433_A8K433_HUMAN:119:375_5wjq_D_1 ModCRE Homology model CGGGCCCGGCGGGGGCGGGGGGGGCGGG Region 119-375 · 1 3D model Open · Scan
TFS_tr_A8K433_A8K433_HUMAN:197:349_2i13_A_1 ModCRE Homology model TTGAAGAGCTAGCAGGCAATT Region 197-349 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 383 aa
116-377

Region 116-377 6 PWM

Residues
262 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 116-3776 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_A8K433_A8K433_HUMAN:325:374_1llm_D_1 1llm 325-374 View model · PDB
Predicted = Low TFS_tr_A8K433_A8K433_HUMAN:116:377_7w1m_H_1 7w1m 116-377 View model · PDB
Predicted = Low TFS_tr_A8K433_A8K433_HUMAN:119:350_5v3j_E_1 5v3j 119-350 View model · PDB
Predicted = Low TFS_tr_A8K433_A8K433_HUMAN:119:350_5v3m_C_1 5v3m 119-350 View model · PDB
Predicted = Low TFS_tr_A8K433_A8K433_HUMAN:119:375_5wjq_D_1 5wjq 119-375 View model · PDB
Predicted = Low TFS_tr_A8K433_A8K433_HUMAN:197:349_2i13_A_1 2i13 197-349 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 116:377 197 349 P:A · DNA:C,D 55.2% / 68.8% 99 View · PDB TFS_tr_A8K433_A8K433_HUMAN:197:349_2i13_A_1
1 5wjq 116:377 119 375 P:D · DNA:A,B 53.7% / 66.9% 91 View · PDB TFS_tr_A8K433_A8K433_HUMAN:119:375_5wjq_D_1
2 5v3m 116:377 119 350 P:C · DNA:A,B 53.4% / 67.2% 83 View · PDB TFS_tr_A8K433_A8K433_HUMAN:119:350_5v3m_C_1
3 5v3j 116:377 119 350 P:E · DNA:A,B 53.4% / 67.2% 83 View · PDB TFS_tr_A8K433_A8K433_HUMAN:119:350_5v3j_E_1
1 1llm 116:377 325,325 374,374 P:C,D · DNA:A,B 44.0% / 62.0% 57,58 View · PDB DIMER_tr_A8K433_A8K433_HUMAN:325:374_1llm_D_1
5 7w1m 116:377 116 377 P:H · DNA:F,G 39.0% / 52.0% 81 View · PDB TFS_tr_A8K433_A8K433_HUMAN:116:377_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
132-153PF00096Zinc finger, C2H2 typeoverlaps 116-377
159-181PF00096Zinc finger, C2H2 typeoverlaps 116-377
187-209PF00096Zinc finger, C2H2 typeoverlaps 116-377
215-237PF00096Zinc finger, C2H2 typeoverlaps 116-377
243-265PF00096Zinc finger, C2H2 typeoverlaps 116-377
271-293PF00096Zinc finger, C2H2 typeoverlaps 116-377
299-321PF00096Zinc finger, C2H2 typeoverlaps 116-377
327-349PF00096Zinc finger, C2H2 typeoverlaps 116-377
355-376PF00096Zinc finger, C2H2 typeoverlaps 116-377