ModCRE DB

Transcription factor

A8K5A9

Zinc finger and SCAN domain-containing protein 2

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 614 aa

138 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)8
MotifPredictionSourceDNA bindingSupportLogoActions
M00943_2.00 NN 70+% CisBP CCCGCTGC 72.9% identity Open · Scan
M00958_2.00 NN 70+% CisBP CGGCATCCC 72.9% identity Open · Scan
M00948_2.00 NN 70+% CisBP GCAGCACC 71.7% identity Open · Scan
M00952_2.00 NN 70+% CisBP GGATGCTC 71.7% identity Open · Scan
M00953_2.00 NN 70+% CisBP ATCTATAT 71.7% identity Open · Scan
M00950_2.00 NN 70+% CisBP GCAGCCCA 70.5% identity Open · Scan
M00959_2.00 NN 70+% CisBP GCCCTCCC 70.5% identity Open · Scan
M00960_2.00 NN 70+% CisBP TGCATCCC 70.5% identity Open · Scan
Nearest Neighbor (70% - 40%)130
MotifPredictionSourceDNA bindingSupportLogoActions
M00944_2.00 NN 70-40% CisBP TCGCTATAA 69.4% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 65.8% identity Open · Scan
M00769_2.00 NN 70-40% CisBP ACTCCCCC 64.5% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 63.5% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 63.0% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 61.0% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 60.7% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 60.0% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 59.8% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 59.5% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 59.4% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 59.3% identity Open · Scan
M08365_2.00 NN 70-40% CisBP GCCAGCAGCCATCAG 59.3% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 59.3% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 59.2% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 58.7% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 58.7% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 58.6% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 58.6% identity Open · Scan
M04515_2.00 NN 70-40% CisBP TATGCTATAACAAGCAGCCCC 58.3% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 58.3% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 58.2% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 58.2% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 58.2% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 58.1% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 58.0% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 57.4% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 57.2% identity Open · Scan
M00619_2.00 NN 70-40% CisBP TAAATCACGG 57.1% identity Open · Scan
M04524_2.00 NN 70-40% CisBP TAAATCACTGCATTTCACTCA 57.1% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 57.1% identity Open · Scan
MA0038.1 NN 70-40% JASPAR CAAATCACTG 57.1% identity Open · Scan
MA0038.2 NN 70-40% JASPAR CAAATCACTGCA 57.1% identity Open · Scan
MA0483.1 NN 70-40% JASPAR AAATCACAGCA 57.1% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 56.6% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 56.5% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 56.5% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 56.5% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 56.3% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 56.2% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 56.1% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 56.0% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 55.8% identity Open · Scan
M07666_2.00 NN 70-40% CisBP ATCTAGCCCCTGCCTACC 55.8% identity Open · Scan
M07725_2.00 NN 70-40% CisBP AAGCACTGTACT 55.5% identity Open · Scan
M08330_2.00 NN 70-40% CisBP TGGGTGCCGGACTGCTGTTCC 55.5% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 55.3% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 55.2% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 55.1% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 55.1% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 55.1% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 55.0% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 54.9% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 54.9% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 54.9% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 54.9% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 54.8% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 54.6% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 54.5% identity Open · Scan
M02896_2.00 NN 70-40% CisBP TGCTTTCTAGGAATTCA 54.4% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 54.4% identity Open · Scan
MA0731.1 NN 70-40% JASPAR TGCTTTCTAGGAATTCA 54.4% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 54.3% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 54.2% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 54.2% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 54.1% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 54.0% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 53.9% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 53.9% identity Open · Scan
M00774_2.00 NN 70-40% CisBP TTAGTATACACAAGT 53.8% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 53.6% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 53.6% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 53.6% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 53.5% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 53.5% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 53.4% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 53.3% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 53.3% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 53.2% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 53.1% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 53.0% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 52.9% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 52.7% identity Open · Scan
M07607_2.00 NN 70-40% CisBP GGCTCCACG 52.7% identity Open · Scan
M07688_2.00 NN 70-40% CisBP GAGCCCCAAGCA 52.7% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 52.5% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 52.4% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 52.3% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 52.1% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 52.1% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 52.0% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 51.8% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 51.8% identity Open · Scan
M08528_2.00 NN 70-40% CisBP ACCCCACTTTTTTG 51.8% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 51.7% identity Open · Scan
M08525_2.00 NN 70-40% CisBP CCCCGCA 51.7% identity Open · Scan
M06135_2.00 NN 70-40% CisBP CAGCCACGCCCACCT 51.5% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 51.4% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 51.4% identity Open · Scan
M07770_2.00 NN 70-40% CisBP CTTGGACTT 51.3% identity Open · Scan
MA0599.1 NN 70-40% JASPAR GCCCCGCCCC 51.3% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 51.2% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 51.2% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 51.2% identity Open · Scan
MA0742.1 NN 70-40% JASPAR GACCACGCCCTTATT 51.2% identity Open · Scan
MA1516.1 NN 70-40% JASPAR GACCACGCCCA 51.2% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 51.1% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 50.9% identity Open · Scan
M07623_2.00 NN 70-40% CisBP GTCTAATAGAGCTGGGCTGCA 50.9% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 50.8% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 50.8% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 50.7% identity Open · Scan
M08390_2.00 NN 70-40% CisBP GCTTTGTTGACTCAC 50.7% identity Open · Scan
M07679_2.00 NN 70-40% CisBP TGCGATCTC 50.4% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 50.3% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 50.1% identity Open · Scan
M03702_2.00 NN 70-40% CisBP GACCCCCCACGACGC 50.0% identity Open · Scan
M06072_2.00 NN 70-40% CisBP CCACGCCCACGCAC 50.0% identity Open · Scan
M07654_2.00 NN 70-40% CisBP TGCCCCCTGGTGGC 50.0% identity Open · Scan
M07685_2.00 NN 70-40% CisBP CTTTCCAGCCAC 50.0% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 50.0% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 50.0% identity Open · Scan
M07757_2.00 NN 70-40% CisBP CCGCGGCC 50.0% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 50.0% identity Open · Scan
M08234_2.00 NN 70-40% CisBP GTCAACTTGACTGGGCCA 50.0% identity Open · Scan
M08312_2.00 NN 70-40% CisBP ATTGGGTTTCTGTTGCTT 50.0% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 50.0% identity Open · Scan
MA1155.1 NN 70-40% JASPAR TGCACACACTGAAAA 50.0% identity Open · Scan
MA1592.1 NN 70-40% JASPAR GGTATGAGTTCTCGCT 50.0% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 614 aa
219-329

Region 219-329 0 PWM

Residues
111 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5EGB
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 219-3291 model
Actions
Predicted = Low TFS_A8K5A9:219:329_5egb_A_1 5egb 219-329 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
69-134PF02023SCAN domainNo overlap with loaded model regions
222-244PF00096Zinc finger, C2H2 typeoverlaps 219-329
250-272PF00096Zinc finger, C2H2 typeoverlaps 219-329
278-300PF00096Zinc finger, C2H2 typeoverlaps 219-329
306-328PF00096Zinc finger, C2H2 typeoverlaps 219-329
334-356PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
362-384PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
390-412PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
418-440PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
446-468PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
474-496PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
502-524PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
530-552PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
558-580PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
586-608PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions