ModCRE DB

Transcription factor

A8K6R9

Zinc finger protein 615

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 742 aa

62 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M07725_2.00 NN 70+% CisBP AAGCACTGTACT 97.6% identity Open · Scan
Nearest Neighbor (70% - 40%)61
MotifPredictionSourceDNA bindingSupportLogoActions
M00953_2.00 NN 70-40% CisBP ATCTATAT 68.2% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 67.0% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 64.7% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 64.7% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 64.7% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 64.3% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 63.5% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 63.5% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 63.5% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 63.5% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 63.0% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 61.9% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 59.1% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 58.5% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 58.4% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 57.9% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 57.6% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 56.9% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 56.9% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 56.8% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 56.5% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 56.5% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 56.3% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 56.0% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 55.9% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 55.8% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 55.7% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 55.1% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 55.1% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 54.7% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 54.4% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 54.4% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 54.1% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 53.8% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 53.4% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 53.3% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 53.3% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 53.2% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 53.0% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 53.0% identity Open · Scan
M07657_2.00 NN 70-40% CisBP CCCCTGCATGTCCCCATTTTT 52.8% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 52.8% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 52.6% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 52.5% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 52.3% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 52.3% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 51.9% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 51.7% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 51.4% identity Open · Scan
M08390_2.00 NN 70-40% CisBP GCTTTGTTGACTCAC 51.4% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 51.2% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 51.2% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 51.0% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 50.8% identity Open · Scan
M07715_2.00 NN 70-40% CisBP CCGCCGCCGCCGTGG 50.8% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 50.5% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 50.3% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 50.3% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 50.1% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 50.0% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 742 aa
298-574

Region 298-574 0 PWM

Residues
277 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5V3J
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 298-5741 model
Actions
Predicted = Low TFS_A8K6R9:298:574_5v3j_E_1 5v3j 298-574 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
7-48PF01352KRAB boxNo overlap with loaded model regions
215-237PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
243-265PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
271-293PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
299-321PF00096Zinc finger, C2H2 typeoverlaps 298-574
329-349PF00096Zinc finger, C2H2 typeoverlaps 298-574
355-377PF00096Zinc finger, C2H2 typeoverlaps 298-574
383-405PF00096Zinc finger, C2H2 typeoverlaps 298-574
411-433PF00096Zinc finger, C2H2 typeoverlaps 298-574
439-461PF00096Zinc finger, C2H2 typeoverlaps 298-574
467-489PF00096Zinc finger, C2H2 typeoverlaps 298-574
495-517PF00096Zinc finger, C2H2 typeoverlaps 298-574
551-573PF00096Zinc finger, C2H2 typeoverlaps 298-574
579-601PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
607-629PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
635-657PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
691-713PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
721-741PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions