Region 295-628 3 PWM
- Residues
- 334 aa
- Domains
- PF00622 · SPRY domain
- 3D models
- 3 active PDBs · 3 summary rows
- Templates
- 6W5N, 7MBN, 7UD5
- Sources
- Predicted = Low
Transcription factor
A8K6T5
Set1/Ash2 histone methyltransferase complex subunit ASH2 (ASH2-like protein)
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 628 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE3
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_tr_A8K6T5_A8K6T5_HUMAN:295:622_7ud5_M_1 | ModCRE | Homology model | GGGGGCTGTTT | Region 295-622 · 1 3D model | Open · Scan | |
| TFS_tr_A8K6T5_A8K6T5_HUMAN:372:628_7mbn_D_1 | ModCRE | Homology model | CACCCCCC | Region 372-628 · 1 3D model | Open · Scan | |
| TFS_tr_A8K6T5_A8K6T5_HUMAN:373:628_6w5n_D_1 | ModCRE | Homology model | AT | Region 373-628 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
628 aa
295-628
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
3 active PDB models
3 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 295-6283 models · 3 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_tr_A8K6T5_A8K6T5_HUMAN:295:622_7ud5_M_1 | 7ud5 | 295-622 | View model · PDB |
| Predicted = Low | TFS_tr_A8K6T5_A8K6T5_HUMAN:372:628_7mbn_D_1 | 7mbn | 372-628 | View model · PDB |
| Predicted = Low | TFS_tr_A8K6T5_A8K6T5_HUMAN:373:628_6w5n_D_1 | 6w5n | 373-628 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 2 | 7mbn | 295:628 | 372 | 628 | P:D · DNA:O,P | 100.0% / 100.0% | 100 | View · PDB TFS_tr_A8K6T5_A8K6T5_HUMAN:372:628_7mbn_D_1 |
| 1 | 7ud5 | 295:628 | 295 | 622 | P:M · DNA:I,J | 99.7% / 99.7% | 99 | View · PDB TFS_tr_A8K6T5_A8K6T5_HUMAN:295:622_7ud5_M_1 |
| 3 | 6w5n | 295:628 | 373 | 628 | P:D · DNA:O,P | 84.4% / 84.4% | 100 | View · PDB TFS_tr_A8K6T5_A8K6T5_HUMAN:373:628_6w5n_D_1 |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 108-160 | PF21257 | ASH2, PHD zinc finger | No overlap with loaded model regions |
| 162-269 | PF21198 | Set1/Ash2 histone methyltransferase complex subunit ASH2-like, WH | No overlap with loaded model regions |
| 421-495 | PF00622 | SPRY domain | overlaps 295-628 |