Transcription factor

A8K7J8

Zinc finger protein 239

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 458 aa

117 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)111

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
MA1124.1	NN 70-40%	JASPAR	CATTCATTCATTC	68.5% identity		Open · Scan
M00959_2.00	NN 70-40%	CisBP	GCCCTCCC	68.2% identity		Open · Scan
M00943_2.00	NN 70-40%	CisBP	CCCGCTGC	67.0% identity		Open · Scan
M00953_2.00	NN 70-40%	CisBP	ATCTATAT	67.0% identity		Open · Scan
M00939_2.00	NN 70-40%	CisBP	CCACCTCA	66.2% identity		Open · Scan
M00952_2.00	NN 70-40%	CisBP	GGATGCTC	66.2% identity		Open · Scan
M00960_2.00	NN 70-40%	CisBP	TGCATCCC	65.8% identity		Open · Scan
M00944_2.00	NN 70-40%	CisBP	TCGCTATAA	65.0% identity		Open · Scan
M00948_2.00	NN 70-40%	CisBP	GCAGCACC	63.8% identity		Open · Scan
M00950_2.00	NN 70-40%	CisBP	GCAGCCCA	63.8% identity		Open · Scan
M00958_2.00	NN 70-40%	CisBP	CGGCATCCC	63.8% identity		Open · Scan
M08325_2.00	NN 70-40%	CisBP	TTTTTTTTT	63.8% identity		Open · Scan
M07579_2.00	NN 70-40%	CisBP	CATCTCCAGGA	62.8% identity		Open · Scan
M00955_2.00	NN 70-40%	CisBP	ACGTCCTCT	62.3% identity		Open · Scan
M07605_2.00	NN 70-40%	CisBP	TATTTTTTTTTATTTTTTTTTTTTTTTTTT	60.4% identity		Open · Scan
M08887_2.00	NN 70-40%	CisBP	CCTCCTCCAGGAAGCCTTCCCTGA	59.5% identity		Open · Scan
M04387_2.00	NN 70-40%	CisBP	CGTGCTCCCC	59.4% identity		Open · Scan
M04613_2.00	NN 70-40%	CisBP	CTCATGTGCTAATTACAAA	59.3% identity		Open · Scan
M02924_2.00	NN 70-40%	CisBP	AGTGTTAACAGAACACCT	58.9% identity		Open · Scan
M07590_2.00	NN 70-40%	CisBP	TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT	58.2% identity		Open · Scan
MA1587.1	NN 70-40%	JASPAR	CCTCGACCTCCTGA	57.8% identity		Open · Scan
M08985_2.00	NN 70-40%	CisBP	TGAGGACCTACTGTGTGCC	57.2% identity		Open · Scan
MA1602.1	NN 70-40%	JASPAR	CGTCTACACGGG	57.1% identity		Open · Scan
M07578_2.00	NN 70-40%	CisBP	CAACTCTCC	57.0% identity		Open · Scan
M08267_2.00	NN 70-40%	CisBP	CAGTTTCATTTTCC	57.0% identity		Open · Scan
M04465_2.00	NN 70-40%	CisBP	GTGATTCTTATCTTATCCTT	56.8% identity		Open · Scan
M07658_2.00	NN 70-40%	CisBP	CCGCCGCAGCCGCCG	56.8% identity		Open · Scan
M08934_2.00	NN 70-40%	CisBP	GCTGTACCTGCTTATTAGGC	56.8% identity		Open · Scan
M08371_2.00	NN 70-40%	CisBP	CCAGACTTGTCCTCT	56.6% identity		Open · Scan
M08901_2.00	NN 70-40%	CisBP	CCAGTTCACACC	56.4% identity		Open · Scan
M08334_2.00	NN 70-40%	CisBP	TTTGTTTTTTTCTGATTGCTTTTTACTTAT	56.3% identity		Open · Scan
M04650_2.00	NN 70-40%	CisBP	GCATAACTGCCCCGCTGCC	56.2% identity		Open · Scan
M07610_2.00	NN 70-40%	CisBP	CCTTCTTCCTCCCCCCTGCCCACC	56.2% identity		Open · Scan
M07588_2.00	NN 70-40%	CisBP	TCCTTCCCTCTTTCC	55.9% identity		Open · Scan
M08908_2.00	NN 70-40%	CisBP	GCTGCTGCTTCTGCTG	55.8% identity		Open · Scan
M07714_2.00	NN 70-40%	CisBP	AGCCCATTGGGGCCTATGCCC	55.5% identity		Open · Scan
M08245_2.00	NN 70-40%	CisBP	TGGTGCCTTATTCCC	55.5% identity		Open · Scan
M00609_2.00	NN 70-40%	CisBP	GGAAGCCCTA	55.4% identity		Open · Scan
M00945_2.00	NN 70-40%	CisBP	CACCGCAC	55.1% identity		Open · Scan
M07777_2.00	NN 70-40%	CisBP	GCCAATTTCCGTGGTGTAAAT	55.1% identity		Open · Scan
M08256_2.00	NN 70-40%	CisBP	GTGCCTT	55.0% identity		Open · Scan
M07678_2.00	NN 70-40%	CisBP	CCCGCCCCCTCCTCCCCCTTCCCACCC	54.7% identity		Open · Scan
M08375_2.00	NN 70-40%	CisBP	TTCCCCATTGGCTACTGCACCGGTCCT	54.6% identity		Open · Scan
M08914_2.00	NN 70-40%	CisBP	ATTTAGTCCATTTACATTTAATGT	54.6% identity		Open · Scan
M04598_2.00	NN 70-40%	CisBP	CGCTAACTCTCCACA	54.5% identity		Open · Scan
M07581_2.00	NN 70-40%	CisBP	TCCCCTGTGCTTCTCTCCCCT	54.5% identity		Open · Scan
M07689_2.00	NN 70-40%	CisBP	ACCCAGGCTCCTTCCATCTTGTGGCTC	54.5% identity		Open · Scan
M08395_2.00	NN 70-40%	CisBP	GCTGCCTACTCTTCC	54.5% identity		Open · Scan
M04505_2.00	NN 70-40%	CisBP	AGCTTTTCCCACAC	54.4% identity		Open · Scan
M07635_2.00	NN 70-40%	CisBP	AAGTTTTCTTGTATTATATCT	54.4% identity		Open · Scan
M08255_2.00	NN 70-40%	CisBP	CTCTTCCGGT	54.4% identity		Open · Scan
M07598_2.00	NN 70-40%	CisBP	CTGACAATACCAAGTGTTGAC	54.0% identity		Open · Scan
M07700_2.00	NN 70-40%	CisBP	ATGTTGTGAGGAAGCCCA	54.0% identity		Open · Scan
M08392_2.00	NN 70-40%	CisBP	CTTCACCTGCTGAGG	53.9% identity		Open · Scan
M07562_2.00	NN 70-40%	CisBP	GAAAAAAAC	53.8% identity		Open · Scan
M07587_2.00	NN 70-40%	CisBP	CCCCCTCCCCAGTCGAGCCCCCGC	53.8% identity		Open · Scan
M07649_2.00	NN 70-40%	CisBP	CCCCCCCCCCCCTCAGGAATGCC	53.7% identity		Open · Scan
M07567_2.00	NN 70-40%	CisBP	CCACTCCACTCA	53.6% identity		Open · Scan
M08283_2.00	NN 70-40%	CisBP	GACTTTTATTTT	53.6% identity		Open · Scan
M08311_2.00	NN 70-40%	CisBP	CTGGAACAGAAGGGGCGA	53.6% identity		Open · Scan
M08292_2.00	NN 70-40%	CisBP	TGTATTCCTTGTCATGTGTGG	53.5% identity		Open · Scan
M07660_2.00	NN 70-40%	CisBP	CCGCGCCTACCTGAGGGCGCGGGCCTGGGG	53.4% identity		Open · Scan
M08279_2.00	NN 70-40%	CisBP	CCTCCCTCC	53.3% identity		Open · Scan
M00786_2.00	NN 70-40%	CisBP	TATATATAT	53.1% identity		Open · Scan
M07667_2.00	NN 70-40%	CisBP	CCGCACAGGCCCCCGGGCCCC	53.1% identity		Open · Scan
M07761_2.00	NN 70-40%	CisBP	CTGATTATTCACCCA	53.1% identity		Open · Scan
M08252_2.00	NN 70-40%	CisBP	CCGGCTCCAGCACCC	53.1% identity		Open · Scan
M08386_2.00	NN 70-40%	CisBP	GCCTTAAAAGCTCAGCAC	53.1% identity		Open · Scan
M01474_2.00	NN 70-40%	CisBP	CGCCGATCAC	52.9% identity		Open · Scan
M01456_2.00	NN 70-40%	CisBP	GTGATCGGCG	52.8% identity		Open · Scan
M08274_2.00	NN 70-40%	CisBP	TTACTTGCAGCCCAACGCATTCCTAAC	52.8% identity		Open · Scan
M07686_2.00	NN 70-40%	CisBP	TAGCTTGTTTCCAGCCAC	52.6% identity		Open · Scan
M07712_2.00	NN 70-40%	CisBP	ACATTTTTTTAATCTAAAAAAACATTTACA	52.6% identity		Open · Scan
M08342_2.00	NN 70-40%	CisBP	GCTCTGCCTCCCTCT	52.6% identity		Open · Scan
M07600_2.00	NN 70-40%	CisBP	GCATTAGC	52.5% identity		Open · Scan
M08373_2.00	NN 70-40%	CisBP	CCCCCTGGCTCTTCCTCT	52.4% identity		Open · Scan
M08254_2.00	NN 70-40%	CisBP	CTGCCCTGGGACTTT	52.3% identity		Open · Scan
M08944_2.00	NN 70-40%	CisBP	TACCATGCTGTTTTGATTAC	52.3% identity		Open · Scan
M00142_2.00	NN 70-40%	CisBP	GTGCTCCT	52.2% identity		Open · Scan
M08247_2.00	NN 70-40%	CisBP	AAAAATAACAAACGG	52.1% identity		Open · Scan
MA1594.1	NN 70-40%	JASPAR	AGGGGACATCACTACAGATCCCAC	52.1% identity		Open · Scan
M08347_2.00	NN 70-40%	CisBP	GCCCTGGGCAGC	51.9% identity		Open · Scan
M08399_2.00	NN 70-40%	CisBP	TACTCTGGGGCCACATGACTC	51.9% identity		Open · Scan
M07648_2.00	NN 70-40%	CisBP	GCTTGCAAAAAAAATTTAACTCCCAGCTC	51.8% identity		Open · Scan
M04611_2.00	NN 70-40%	CisBP	CTTTCGGACAC	51.7% identity		Open · Scan
M08329_2.00	NN 70-40%	CisBP	GCTGCATAGTATTCC	51.7% identity		Open · Scan
M08357_2.00	NN 70-40%	CisBP	GAGCCTGCTACTGAGCCTGGG	51.7% identity		Open · Scan
M00782_2.00	NN 70-40%	CisBP	AGTGTGCGCTA	51.6% identity		Open · Scan
M07699_2.00	NN 70-40%	CisBP	GGTTTAT	51.6% identity		Open · Scan
M08355_2.00	NN 70-40%	CisBP	GCGAACTCCTATTCATCC	51.6% identity		Open · Scan
MA1154.1	NN 70-40%	JASPAR	CTTTCCCACAACACGAC	51.6% identity		Open · Scan
M01044_2.00	NN 70-40%	CisBP	TCTCTCTTTC	51.5% identity		Open · Scan
M04590_2.00	NN 70-40%	CisBP	TGCGCTAACCATTGC	51.5% identity		Open · Scan
M07683_2.00	NN 70-40%	CisBP	GTGGGAAAGCCT	51.3% identity		Open · Scan
MA1601.1	NN 70-40%	JASPAR	ATGTGGGAAA	51.3% identity		Open · Scan
M00132_2.00	NN 70-40%	CisBP	TGCTACCGTT	51.2% identity		Open · Scan
M04515_2.00	NN 70-40%	CisBP	TATGCTATAACAAGCAGCCCC	51.2% identity		Open · Scan
MA1656.1	NN 70-40%	JASPAR	CCAAGCCCAACCAG	51.2% identity		Open · Scan
M07707_2.00	NN 70-40%	CisBP	TCCCGC	51.1% identity		Open · Scan
M07733_2.00	NN 70-40%	CisBP	TCTTTCTCTCTCTCC	51.1% identity		Open · Scan
M04621_2.00	NN 70-40%	CisBP	AGCAATTCCGCTCA	51.0% identity		Open · Scan
MA1589.1	NN 70-40%	JASPAR	TAGGAGTGGAATTGCTGGGTC	51.0% identity		Open · Scan
M03671_2.00	NN 70-40%	CisBP	ATTACCATACAAGTGCAC	50.8% identity		Open · Scan
M01174_2.00	NN 70-40%	CisBP	GCTACCGT	50.6% identity		Open · Scan
MA1542.1	NN 70-40%	JASPAR	TGCTACTGTT	50.6% identity		Open · Scan
M08860_2.00	NN 70-40%	CisBP	TCTTATAAGGGCACTAATCCCATT	50.3% identity		Open · Scan
M08309_2.00	NN 70-40%	CisBP	AAAAACCCCCCTGCAGAGCCCAGCCCT	50.1% identity		Open · Scan
M04463_2.00	NN 70-40%	CisBP	CACCACGCCCA	50.0% identity		Open · Scan
M07623_2.00	NN 70-40%	CisBP	GTCTAATAGAGCTGGGCTGCA	50.0% identity		Open · Scan
MA0039.1	NN 70-40%	JASPAR	TAAAGGAAGG	50.0% identity		Open · Scan
MA0039.3	NN 70-40%	JASPAR	CCACACCCTGC	50.0% identity		Open · Scan

ModCRE6

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
DIMER_tr_A8K7J8_A8K7J8_HUMAN:373:424_1llm_D_1	ModCRE	Homology model	TTTCGGCGCAAA	Region 373-424 · 1 3D model		Open · Scan
TFS_tr_A8K7J8_A8K7J8_HUMAN:176:453_5wjq_D_1	ModCRE	Homology model	CCAACCACACCCCCCCCCCCCCCCCCCC	Region 176-453 · 1 3D model		Open · Scan
TFS_tr_A8K7J8_A8K7J8_HUMAN:184:453_5v3j_E_1	ModCRE	Homology model	CCCCCGGGTTTCCCCCCCCCCTGGAA	Region 184-453 · 1 3D model		Open · Scan
TFS_tr_A8K7J8_A8K7J8_HUMAN:184:453_5v3m_C_1	ModCRE	Homology model	CGCACCCCACACCCCCCCCCCCCCCT	Region 184-453 · 1 3D model		Open · Scan
TFS_tr_A8K7J8_A8K7J8_HUMAN:199:449_7w1m_H_1	ModCRE	Homology model	TTTCCGCGGGGGGCCCCCCCGAGACCCAGCCTGGCCCAA	Region 199-449 · 1 3D model		Open · Scan
TFS_tr_A8K7J8_A8K7J8_HUMAN:300:453_2i13_A_1	ModCRE	Homology model	AACTAGTAGTAGTATCTTTAT	Region 300-453 · 1 3D model		Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 458 aa

176-453

Region 176-453 6 PWM

Residues

278 aa

Domains

PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type

3D models

6 active PDBs · 6 summary rows

Templates

1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M

Sources

Predicted = Low

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

6 active PDB models 6 summary rows

Region 176-4536 models · 6 summary rows

Source ↕	Model ↕	Template ↕	Residues modeled ↕	Actions
Predicted = Low	DIMER_tr_A8K7J8_A8K7J8_HUMAN:373:424_1llm_D_1	1llm	373-424	View model · PDB
Predicted = Low	TFS_tr_A8K7J8_A8K7J8_HUMAN:176:453_5wjq_D_1	5wjq	176-453	View model · PDB
Predicted = Low	TFS_tr_A8K7J8_A8K7J8_HUMAN:184:453_5v3j_E_1	5v3j	184-453	View model · PDB
Predicted = Low	TFS_tr_A8K7J8_A8K7J8_HUMAN:184:453_5v3m_C_1	5v3m	184-453	View model · PDB
Predicted = Low	TFS_tr_A8K7J8_A8K7J8_HUMAN:199:449_7w1m_H_1	7w1m	199-449	View model · PDB
Predicted = Low	TFS_tr_A8K7J8_A8K7J8_HUMAN:300:453_2i13_A_1	2i13	300-453	View model · PDB

Model-summary evidence imported for this region.

Rank	Template	Domain	N-tails	C-tails	Chains	Identity / similarity	Coverage	Model file
4	2i13	176:457	300	453	P:A · DNA:C,D	61.0% / 70.8%	100	View · PDB TFS_tr_A8K7J8_A8K7J8_HUMAN:300:453_2i13_A_1
2	5v3m	176:457	184	453	P:C · DNA:A,B	48.9% / 68.5%	97	View · PDB TFS_tr_A8K7J8_A8K7J8_HUMAN:184:453_5v3m_C_1
3	5v3j	176:457	184	453	P:E · DNA:A,B	48.9% / 68.5%	97	View · PDB TFS_tr_A8K7J8_A8K7J8_HUMAN:184:453_5v3j_E_1
1	5wjq	176:457	176	453	P:D · DNA:A,B	48.2% / 66.5%	98	View · PDB TFS_tr_A8K7J8_A8K7J8_HUMAN:176:453_5wjq_D_1
1	1llm	176:457	373,373	424,424	P:C,D · DNA:A,B	44.2% / 65.4%	59,61	View · PDB DIMER_tr_A8K7J8_A8K7J8_HUMAN:373:424_1llm_D_1
5	7w1m	176:457	199	449	P:H · DNA:F,G	35.9% / 49.6%	77	View · PDB TFS_tr_A8K7J8_A8K7J8_HUMAN:199:449_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
207-229	PF00096	Zinc finger, C2H2 type	overlaps 176-453
235-257	PF00096	Zinc finger, C2H2 type	overlaps 176-453
263-285	PF00096	Zinc finger, C2H2 type	overlaps 176-453
291-313	PF00096	Zinc finger, C2H2 type	overlaps 176-453
319-341	PF00096	Zinc finger, C2H2 type	overlaps 176-453
347-369	PF00096	Zinc finger, C2H2 type	overlaps 176-453
375-397	PF00096	Zinc finger, C2H2 type	overlaps 176-453
403-425	PF00096	Zinc finger, C2H2 type	overlaps 176-453
431-453	PF00096	Zinc finger, C2H2 type	overlaps 176-453