ModCRE DB

Transcription factor

A8K811

cDNA FLJ76677, highly similar to Homo sapiens forkhead box I1 (FOXI1), transcript variant 1, mRNA

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 378 aa

55 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
MA0042.1 NN 70+% JASPAR GGATGTTTGTTT 99.7% identity Open · Scan
M04827_2.00 NN 70+% CisBP GTAATGTAAACAA 74.8% identity Open · Scan
Nearest Neighbor (70% - 40%)53
MotifPredictionSourceDNA bindingSupportLogoActions
M04848_2.00 NN 70-40% CisBP AACGTCAACAC 68.4% identity Open · Scan
M01974_2.00 NN 70-40% CisBP GTAAACAA 68.2% identity Open · Scan
MA0846.1 NN 70-40% JASPAR TAAGTAAACAAA 65.7% identity Open · Scan
M00791_2.00 NN 70-40% CisBP ATGTAAACAA 64.7% identity Open · Scan
M09669_2.00 NN 70-40% CisBP ATGTAAACACACC 64.7% identity Open · Scan
MA0613.1 NN 70-40% JASPAR GTAAACAA 64.7% identity Open · Scan
M00164_2.00 NN 70-40% CisBP AATGTAAACA 64.5% identity Open · Scan
M03741_2.00 NN 70-40% CisBP TTATGTAAACAAT 64.2% identity Open · Scan
M10565_2.00 NN 70-40% CisBP AAACAAACAATC 64.2% identity Open · Scan
M10570_2.00 NN 70-40% CisBP CTTAAGTAAACAATGG 64.2% identity Open · Scan
MA0031.1 NN 70-40% JASPAR GTAAACAT 64.2% identity Open · Scan
MA0041.1 NN 70-40% JASPAR GAATGTTTGTTT 64.2% identity Open · Scan
MA0847.1 NN 70-40% JASPAR GTAAACA 64.2% identity Open · Scan
M10571_2.00 NN 70-40% CisBP AAAAATAAATATAAGG 63.8% identity Open · Scan
M09104_2.00 NN 70-40% CisBP CCTTGTTTACTTT 63.4% identity Open · Scan
M03058_2.00 NN 70-40% CisBP GTAAACATAAACA 63.3% identity Open · Scan
M01990_2.00 NN 70-40% CisBP TTGTTTACA 63.2% identity Open · Scan
M03046_2.00 NN 70-40% CisBP GTAAACAA 62.5% identity Open · Scan
MA0851.1 NN 70-40% JASPAR AAAAAGTAAACAAACAC 62.5% identity Open · Scan
MA1487.1 NN 70-40% JASPAR CCTTAAATAAACAAT 62.1% identity Open · Scan
M01982_2.00 NN 70-40% CisBP TATGTAAACA 62.0% identity Open · Scan
M10528_2.00 NN 70-40% CisBP ATAATAATATTTTT 61.5% identity Open · Scan
MA0614.1 NN 70-40% JASPAR GTAAACAA 61.5% identity Open · Scan
M01987_2.00 NN 70-40% CisBP GTAAACAAA 61.2% identity Open · Scan
M09093_2.00 NN 70-40% CisBP AAATAAACAATA 59.7% identity Open · Scan
MA1607.1 NN 70-40% JASPAR AATATGTAAACAAA 59.5% identity Open · Scan
MA0032.1 NN 70-40% JASPAR GGTAAGTA 59.4% identity Open · Scan
MA0047.2 NN 70-40% JASPAR TGTTTACTTAGG 59.3% identity Open · Scan
MA0047.3 NN 70-40% JASPAR ATGTAAACATA 59.3% identity Open · Scan
MA0148.1 NN 70-40% JASPAR TGTTTACTTTG 59.3% identity Open · Scan
MA0030.1 NN 70-40% JASPAR CAAACGTAAACAAT 59.1% identity Open · Scan
MA1606.1 NN 70-40% JASPAR ATGTAAACAAA 59.1% identity Open · Scan
MA0047.1 NN 70-40% JASPAR CAATATTTACTT 58.3% identity Open · Scan
MA1683.1 NN 70-40% JASPAR ATGTAAACATA 58.3% identity Open · Scan
M00665_2.00 NN 70-40% CisBP ATGTAAACAAA 57.2% identity Open · Scan
M01983_2.00 NN 70-40% CisBP TGTTTACATA 57.2% identity Open · Scan
MA0845.1 NN 70-40% JASPAR TATGTAAATAT 57.2% identity Open · Scan
MA0040.1 NN 70-40% JASPAR TATTGTTTATT 57.0% identity Open · Scan
M03735_2.00 NN 70-40% CisBP AAACAATAATATT 56.5% identity Open · Scan
M03743_2.00 NN 70-40% CisBP TATGTAAATATTTACATA 55.0% identity Open · Scan
M00664_2.00 NN 70-40% CisBP ATAAACAA 54.1% identity Open · Scan
M01016_2.00 NN 70-40% CisBP TGGACGCTAA 53.7% identity Open · Scan
MA1103.1 NN 70-40% JASPAR ATGTAAACAAG 53.1% identity Open · Scan
MA0033.1 NN 70-40% JASPAR TATACATA 53.0% identity Open · Scan
MA0479.1 NN 70-40% JASPAR TCCAATCCACA 51.8% identity Open · Scan
M03034_2.00 NN 70-40% CisBP GTAAACA 51.2% identity Open · Scan
MA0852.1 NN 70-40% JASPAR AAAATGTAAACAAACAG 51.0% identity Open · Scan
M00044_2.00 NN 70-40% CisBP GGTAAACAA 50.5% identity Open · Scan
M01011_2.00 NN 70-40% CisBP AAGGACGCGA 50.0% identity Open · Scan
M01227_2.00 NN 70-40% CisBP GTAAACAA 50.0% identity Open · Scan
M04835_2.00 NN 70-40% CisBP ACGCGTCGTTACGACGCGT 50.0% identity Open · Scan
MA0852.2 NN 70-40% JASPAR AATGTAAACAAGGC 50.0% identity Open · Scan
MA1489.1 NN 70-40% JASPAR GTAAACAA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 378 aa
121-184

Region 121-184 0 PWM

Residues
64 aa
Domains
PF00250 · Forkhead domain
3D models
1 active PDB
Templates
2A07
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 121-1841 model
Actions
Predicted = Low DIMER_A8K811:121:184_2a07_K_1 2a07 121-184 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
123-207PF00250Forkhead domainoverlaps 121-184