ModCRE DB

Transcription factor

A8K8T4

cDNA FLJ76364, highly similar to Homo sapiens zinc finger protein ZNF468 (ZNF468), transcript variant 2, mRNA

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 522 aa

85 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
M07754_2.00 NN 70+% CisBP CGCCCCCTCCCT 99.6% identity Open · Scan
M07723_2.00 NN 70+% CisBP CCGCTGCTCCCTGCT 70.1% identity Open · Scan
Nearest Neighbor (70% - 40%)83
MotifPredictionSourceDNA bindingSupportLogoActions
M07701_2.00 NN 70-40% CisBP CCTGGGCTAGGCCCTGGC 68.9% identity Open · Scan
M07618_2.00 NN 70-40% CisBP CCTTTGGTGCTC 68.1% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 65.8% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 65.8% identity Open · Scan
M07747_2.00 NN 70-40% CisBP TGGTCTATAAAGGGCCTGGTT 65.0% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 64.7% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 64.7% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 64.2% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 63.5% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 62.3% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 62.3% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 62.3% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 62.3% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 61.2% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 61.1% identity Open · Scan
M07759_2.00 NN 70-40% CisBP GGAGCGCCCCTGCCCGGC 60.5% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 60.3% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 60.1% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 60.0% identity Open · Scan
M07657_2.00 NN 70-40% CisBP CCCCTGCATGTCCCCATTTTT 59.9% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 59.3% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 58.7% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 58.7% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 57.3% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 56.3% identity Open · Scan
M08263_2.00 NN 70-40% CisBP ATCTCGGCACTTTGGGAGGCCA 56.0% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 55.8% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 55.7% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 55.7% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 55.3% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 55.2% identity Open · Scan
M04430_2.00 NN 70-40% CisBP GACCACGCCCA 55.1% identity Open · Scan
MA0742.1 NN 70-40% JASPAR GACCACGCCCTTATT 55.1% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 55.0% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 54.2% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 54.2% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 54.0% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 53.8% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 53.7% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 53.7% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 53.5% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 53.5% identity Open · Scan
M01538_2.00 NN 70-40% CisBP GCCCCTGA 53.4% identity Open · Scan
M08540_2.00 NN 70-40% CisBP CCCCT 53.4% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 53.3% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 53.3% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 53.2% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 53.2% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 52.9% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 52.8% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 52.6% identity Open · Scan
MA1516.1 NN 70-40% JASPAR GACCACGCCCA 52.6% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 52.4% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 52.4% identity Open · Scan
M08903_2.00 NN 70-40% CisBP ATTCCATTCTATTCCATTCT 52.4% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 52.3% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 52.3% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 52.2% identity Open · Scan
M00645_2.00 NN 70-40% CisBP CGCCCACGCA 52.0% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 52.0% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 51.8% identity Open · Scan
M01457_2.00 NN 70-40% CisBP GCGCACGGAC 51.7% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 51.4% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 51.3% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 51.3% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 51.3% identity Open · Scan
MA0599.1 NN 70-40% JASPAR GCCCCGCCCC 51.3% identity Open · Scan
M01042_2.00 NN 70-40% CisBP TGGGACCTGA 51.1% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 51.1% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 51.0% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 51.0% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 50.9% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 50.8% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 50.8% identity Open · Scan
M00143_2.00 NN 70-40% CisBP CCCCCCCACG 50.6% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 50.6% identity Open · Scan
MA0753.1 NN 70-40% JASPAR CCCCCCCCAC 50.6% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 50.5% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 50.3% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 50.2% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 50.0% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 50.0% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 522 aa
240-518

Region 240-518 0 PWM

Residues
279 aa
Domains
PF00096 · Zinc finger, C2H2 type PF13465 · Zinc-finger double domain PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 240-5181 model
Actions
Predicted = Low TFS_A8K8T4:240:518_5wjq_D_1 5wjq 240-518 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
8-48PF01352KRAB boxNo overlap with loaded model regions
271-293PF00096Zinc finger, C2H2 typeoverlaps 240-518
313-338PF13465Zinc-finger double domainoverlaps 240-518
355-377PF00096Zinc finger, C2H2 typeoverlaps 240-518
383-405PF00096Zinc finger, C2H2 typeoverlaps 240-518
411-433PF00096Zinc finger, C2H2 typeoverlaps 240-518
439-461PF00096Zinc finger, C2H2 typeoverlaps 240-518
467-489PF00096Zinc finger, C2H2 typeoverlaps 240-518
495-517PF00096Zinc finger, C2H2 typeoverlaps 240-518