ModCRE DB

Transcription factor

A8K9W2

cDNA FLJ75863, highly similar to Homo sapiens zinc finger protein 432 (ZNF432), mRNA

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 652 aa

70 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)65
MotifPredictionSourceDNA bindingSupportLogoActions
M00952_2.00 NN 70-40% CisBP GGATGCTC 67.0% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 67.0% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 65.8% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 65.8% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 64.7% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 64.7% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 63.5% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 63.5% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 63.5% identity Open · Scan
M07725_2.00 NN 70-40% CisBP AAGCACTGTACT 63.4% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 63.0% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 62.3% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 60.9% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 60.2% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 59.1% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 58.7% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 58.5% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 58.4% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 58.4% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 57.9% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 57.0% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 56.9% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 56.6% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 56.5% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 56.1% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 55.9% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 55.5% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 55.3% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 55.2% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 55.2% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 54.6% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 54.5% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 53.9% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 53.9% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 53.6% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 53.5% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 53.3% identity Open · Scan
M07691_2.00 NN 70-40% CisBP CCTGCAGCCACCTTGGCCTTG 53.2% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 53.2% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 53.2% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 53.1% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 53.1% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 53.0% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 53.0% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 53.0% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 52.5% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 52.4% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 52.4% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 52.4% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 52.3% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 52.1% identity Open · Scan
M08234_2.00 NN 70-40% CisBP GTCAACTTGACTGGGCCA 51.7% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 51.6% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 51.4% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 51.1% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 50.8% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 50.7% identity Open · Scan
M08390_2.00 NN 70-40% CisBP GCTTTGTTGACTCAC 50.7% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 50.7% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 50.5% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 50.4% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 50.3% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 50.2% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 50.0% identity Open · Scan
M08903_2.00 NN 70-40% CisBP ATTCCATTCTATTCCATTCT 50.0% identity Open · Scan
ModCRE5
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_A8K9W2_A8K9W2_HUMAN:270:423_2i13_A_1 ModCRE Homology model CTCGGCCTGAAGCCTATGAGC Region 270-423 · 1 3D model Open · Scan
TFS_tr_A8K9W2_A8K9W2_HUMAN:286:564_5wjq_D_1 ModCRE Homology model CCTTCACCCCCCCGAACCCCCCCCCCCG Region 286-564 · 1 3D model Open · Scan
TFS_tr_A8K9W2_A8K9W2_HUMAN:314:424_5ei9_E_1 ModCRE Homology model CCCCTCCCCCTCTGGGG Region 314-424 · 1 3D model Open · Scan
TFS_tr_A8K9W2_A8K9W2_HUMAN:344:620_5v3j_E_1 ModCRE Homology model CTTTACCAACCGGGTTCCCCCCCCCC Region 344-620 · 1 3D model Open · Scan
TFS_tr_A8K9W2_A8K9W2_HUMAN:344:620_5v3m_C_1 ModCRE Homology model CGGCCCGACCTCCCCCCGGGCCCCCC Region 344-620 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 652 aa
270-620

Region 270-620 5 PWM

Residues
351 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5EI9, 5V3J, 5V3M, 5WJQ
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 270-6206 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_A8K9W2_A8K9W2_HUMAN:511:550_1llm_D_1 1llm 511-550 View model · PDB
Predicted = Low TFS_tr_A8K9W2_A8K9W2_HUMAN:270:423_2i13_A_1 2i13 270-423 View model · PDB
Predicted = Low TFS_tr_A8K9W2_A8K9W2_HUMAN:286:564_5wjq_D_1 5wjq 286-564 View model · PDB
Predicted = Low TFS_tr_A8K9W2_A8K9W2_HUMAN:314:424_5ei9_E_1 5ei9 314-424 View model · PDB
Predicted = Low TFS_tr_A8K9W2_A8K9W2_HUMAN:344:620_5v3j_E_1 5v3j 344-620 View model · PDB
Predicted = Low TFS_tr_A8K9W2_A8K9W2_HUMAN:344:620_5v3m_C_1 5v3m 344-620 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
5 5ei9 203:648 314 424 P:E · DNA:A,B 65.8% / 81.1% 100 View · PDB TFS_tr_A8K9W2_A8K9W2_HUMAN:314:424_5ei9_E_1
4 2i13 203:648 270 423 P:A · DNA:C,D 59.7% / 68.2% 100 View · PDB TFS_tr_A8K9W2_A8K9W2_HUMAN:270:423_2i13_A_1
1 5wjq 203:648 286 564 P:D · DNA:A,B 51.3% / 63.4% 99 View · PDB TFS_tr_A8K9W2_A8K9W2_HUMAN:286:564_5wjq_D_1
2 5v3m 203:648 344 620 P:C · DNA:A,B 50.9% / 63.9% 100 View · PDB TFS_tr_A8K9W2_A8K9W2_HUMAN:344:620_5v3m_C_1
3 5v3j 203:648 344 620 P:E · DNA:A,B 50.9% / 63.9% 100 View · PDB TFS_tr_A8K9W2_A8K9W2_HUMAN:344:620_5v3j_E_1
1 1llm 203:648 511,511 550,550 P:C,D · DNA:A,B 50.0% / 62.5% 45,47 View · PDB DIMER_tr_A8K9W2_A8K9W2_HUMAN:511:550_1llm_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
8-48PF01352KRAB boxNo overlap with loaded model regions
205-227PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
235-255PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
261-283PF00096Zinc finger, C2H2 typeoverlaps 270-620
289-311PF00096Zinc finger, C2H2 typeoverlaps 270-620
317-339PF00096Zinc finger, C2H2 typeoverlaps 270-620
345-367PF00096Zinc finger, C2H2 typeoverlaps 270-620
373-395PF00096Zinc finger, C2H2 typeoverlaps 270-620
401-423PF00096Zinc finger, C2H2 typeoverlaps 270-620
429-451PF00096Zinc finger, C2H2 typeoverlaps 270-620
457-479PF00096Zinc finger, C2H2 typeoverlaps 270-620
485-507PF00096Zinc finger, C2H2 typeoverlaps 270-620
513-535PF00096Zinc finger, C2H2 typeoverlaps 270-620
541-563PF00096Zinc finger, C2H2 typeoverlaps 270-620
599-619PF00096Zinc finger, C2H2 typeoverlaps 270-620
625-647PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions