ModCRE DB

Transcription factor

A8MQ14 - ZNF850

Zinc finger protein 850

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 1090 aa

87 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)81
MotifPredictionSourceDNA bindingSupportLogoActions
M00939_2.00 NN 70-40% CisBP CCACCTCA 69.4% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 67.0% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 67.0% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 67.0% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 66.3% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 65.8% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 65.8% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 65.8% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 64.7% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 64.7% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 64.7% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 64.0% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 63.5% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 62.7% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 62.2% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 62.0% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 61.1% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 60.7% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 60.3% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 59.8% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 59.7% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 59.4% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 59.0% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 58.6% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 58.4% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 58.3% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 58.1% identity Open · Scan
M07693_2.00 NN 70-40% CisBP CTCCTGTGTGTGCCTTGGCTG 57.8% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 57.8% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 57.5% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 56.8% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 56.3% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 56.1% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 56.0% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 56.0% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 56.0% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 55.9% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 55.8% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 55.7% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 55.7% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 55.7% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 55.5% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 55.3% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 55.2% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 55.1% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 54.8% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 54.6% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 54.5% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 53.5% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 53.3% identity Open · Scan
M07634_2.00 NN 70-40% CisBP AAACGTCCACG 53.2% identity Open · Scan
M07633_2.00 NN 70-40% CisBP CTCTCGTTGTGCCTTTGCCAT 53.0% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 53.0% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 53.0% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 52.8% identity Open · Scan
M01440_2.00 NN 70-40% CisBP TACGCCAC 52.7% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 52.7% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 52.6% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 52.4% identity Open · Scan
M08330_2.00 NN 70-40% CisBP TGGGTGCCGGACTGCTGTTCC 52.4% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 52.3% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 52.0% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 51.9% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 51.5% identity Open · Scan
M07747_2.00 NN 70-40% CisBP TGGTCTATAAAGGGCCTGGTT 51.4% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 51.2% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 51.2% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 51.2% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 51.2% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 51.0% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 50.9% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 50.8% identity Open · Scan
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 50.8% identity Open · Scan
MA0056.1 NN 70-40% JASPAR TGGGGA 50.8% identity Open · Scan
M07654_2.00 NN 70-40% CisBP TGCCCCCTGGTGGC 50.7% identity Open · Scan
M07659_2.00 NN 70-40% CisBP GTCTTCCAAGTAGCTGGTGTT 50.3% identity Open · Scan
M07731_2.00 NN 70-40% CisBP TTTCCCAGCAGCAACAGCACCGCCCCCCCC 50.2% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 50.1% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 50.1% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 50.0% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 50.0% identity Open · Scan
ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_sp_A8MQ14_ZN850_HUMAN:951:1000_1llm_D_1 ModCRE Homology model ACCCGCGCGGGC Region 951-1000 · 1 3D model Open · Scan
TFS_sp_A8MQ14_ZN850_HUMAN:308:584_5v3j_E_1 ModCRE Homology model CTCCCAGTACACCCCGTCCGCACGCG Region 308-584 · 1 3D model Open · Scan
TFS_sp_A8MQ14_ZN850_HUMAN:308:584_5v3m_C_1 ModCRE Homology model CGCAACCCCCCCCCCCACCCCAGCCC Region 308-584 · 1 3D model Open · Scan
TFS_sp_A8MQ14_ZN850_HUMAN:334:612_5wjq_D_1 ModCRE Homology model ACCCCCCCCCGCGCCCCGGATTAGCCCC Region 334-612 · 1 3D model Open · Scan
TFS_sp_A8MQ14_ZN850_HUMAN:430:583_2i13_A_1 ModCRE Homology model GTGAAGAGCGAGCGCCTGATT Region 430-583 · 1 3D model Open · Scan
TFS_sp_A8MQ14_ZN850_HUMAN:561:859_7w1m_H_1 ModCRE Homology model AAAGCCCCCAAACAGAGGGGGGTCGTCCTGAAAAGGACCTGCA Region 561-859 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1090 aa
308-859
951-1000

Region 308-859 5 PWM

Residues
552 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
5 active PDBs · 5 summary rows
Templates
2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models

Region 951-1000 1 PWM

Residues
50 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB · 1 summary row
Templates
1LLM
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 308-8595 models · 5 summary rows
Actions
Predicted = Low TFS_sp_A8MQ14_ZN850_HUMAN:308:584_5v3j_E_1 5v3j 308-584 View model · PDB
Predicted = Low TFS_sp_A8MQ14_ZN850_HUMAN:308:584_5v3m_C_1 5v3m 308-584 View model · PDB
Predicted = Low TFS_sp_A8MQ14_ZN850_HUMAN:334:612_5wjq_D_1 5wjq 334-612 View model · PDB
Predicted = Low TFS_sp_A8MQ14_ZN850_HUMAN:430:583_2i13_A_1 2i13 430-583 View model · PDB
Predicted = Low TFS_sp_A8MQ14_ZN850_HUMAN:561:859_7w1m_H_1 7w1m 561-859 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 308:614 430 583 P:A · DNA:C,D 61.0% / 67.5% 100 View · PDB TFS_sp_A8MQ14_ZN850_HUMAN:430:583_2i13_A_1
1 5wjq 308:614 334 612 P:D · DNA:A,B 58.4% / 73.1% 99 View · PDB TFS_sp_A8MQ14_ZN850_HUMAN:334:612_5wjq_D_1
2 5v3m 308:614 308 584 P:C · DNA:A,B 57.0% / 72.2% 100 View · PDB TFS_sp_A8MQ14_ZN850_HUMAN:308:584_5v3m_C_1
3 5v3j 308:614 308 584 P:E · DNA:A,B 57.0% / 72.2% 100 View · PDB TFS_sp_A8MQ14_ZN850_HUMAN:308:584_5v3j_E_1
5 7w1m 308:614 561 859 P:H · DNA:F,G 36.0% / 50.3% 92 View · PDB TFS_sp_A8MQ14_ZN850_HUMAN:561:859_7w1m_H_1
Region 951-10001 model · 1 summary row
Actions
Predicted = Low DIMER_sp_A8MQ14_ZN850_HUMAN:951:1000_1llm_D_1 1llm 951-1000 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1llm 308:614 951,951 1000,1000 P:C,D · DNA:A,B 42.0% / 64.0% 57,58 View · PDB DIMER_sp_A8MQ14_ZN850_HUMAN:951:1000_1llm_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
6-47PF01352KRAB boxNo overlap with loaded model regions
197-219PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
281-303PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
309-331PF00096Zinc finger, C2H2 typeoverlaps 308-859
337-359PF00096Zinc finger, C2H2 typeoverlaps 308-859
365-387PF00096Zinc finger, C2H2 typeoverlaps 308-859
393-415PF00096Zinc finger, C2H2 typeoverlaps 308-859
421-443PF00096Zinc finger, C2H2 typeoverlaps 308-859
449-471PF00096Zinc finger, C2H2 typeoverlaps 308-859
479-499PF00096Zinc finger, C2H2 typeoverlaps 308-859
505-527PF00096Zinc finger, C2H2 typeoverlaps 308-859
533-555PF00096Zinc finger, C2H2 typeoverlaps 308-859
561-583PF00096Zinc finger, C2H2 typeoverlaps 308-859
589-611PF00096Zinc finger, C2H2 typeoverlaps 308-859
617-639PF00096Zinc finger, C2H2 typeoverlaps 308-859
645-667PF00096Zinc finger, C2H2 typeoverlaps 308-859
673-695PF00096Zinc finger, C2H2 typeoverlaps 308-859
701-723PF00096Zinc finger, C2H2 typeoverlaps 308-859
733-751PF00096Zinc finger, C2H2 typeoverlaps 308-859
757-779PF00096Zinc finger, C2H2 typeoverlaps 308-859
785-804PF00096Zinc finger, C2H2 typeoverlaps 308-859
813-832PF00096Zinc finger, C2H2 typeoverlaps 308-859
841-863PF00096Zinc finger, C2H2 typeoverlaps 308-859
869-891PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
897-919PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
925-947PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
953-975PF00096Zinc finger, C2H2 typeoverlaps 951-1000
981-1003PF00096Zinc finger, C2H2 typeoverlaps 951-1000
1009-1031PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
1037-1059PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
1065-1087PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions