ModCRE DB

Transcription factor

A8MTQ0 - NOTO

Homeobox protein notochord

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 251 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known5
MotifPredictionSourceDNA bindingSupportLogoActions
MA0710.1 Known JASPAR GCTAATTAGC Direct PWM Open · Scan
MA0710.2 Known JASPAR CTAATTA Direct PWM Open · Scan
M03241_2.00 Known CisBP GCTAATTAGC Direct PWM Open · Scan
M05390_2.00 Known CisBP CTAATTAG Direct PWM Open · Scan
M05391_2.00 Known CisBP CTAATTGG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 251 aa
155-214

Region 155-214 0 PWM

Residues
60 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
1FJL
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 155-2141 model
Actions
Predicted = Low DIMER_A8MTQ0:155:214_1fjl_A_1 1fjl 155-214 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
157-213PF00046Homeodomainoverlaps 155-214