ModCRE DB

Transcription factor

A8MUV8 - ZNF727

Zinc finger protein 727

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 499 aa

63 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M07767_2.00 NN 70+% CisBP AAAAACCCCAGA 82.6% identity Open · Scan
Nearest Neighbor (70% - 40%)62
MotifPredictionSourceDNA bindingSupportLogoActions
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 68.6% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 61.4% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 61.1% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 60.6% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 60.2% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 60.0% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 60.0% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 60.0% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 60.0% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 60.0% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 60.0% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 60.0% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 59.8% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 58.8% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 58.6% identity Open · Scan
MA1599.1 NN 70-40% JASPAR CGGGCCAAGCCCCTAT 58.6% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 58.1% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 57.8% identity Open · Scan
M07715_2.00 NN 70-40% CisBP CCGCCGCCGCCGTGG 57.5% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 57.4% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 57.3% identity Open · Scan
M08921_2.00 NN 70-40% CisBP CCTCATTCTTCTTGGACATG 57.2% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 56.1% identity Open · Scan
M07586_2.00 NN 70-40% CisBP GGGACCCGGGTGGGGGCGTCCCCC 56.1% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 56.1% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 56.0% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 55.8% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 54.7% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 54.4% identity Open · Scan
M08263_2.00 NN 70-40% CisBP ATCTCGGCACTTTGGGAGGCCA 54.2% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 53.6% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 53.6% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 53.3% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 53.2% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 53.0% identity Open · Scan
M08381_2.00 NN 70-40% CisBP ACATTTTGTCCTCCTAGTCCT 53.0% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 52.8% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 52.8% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 52.7% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 52.3% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 52.3% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 52.2% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 52.2% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 52.1% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 52.1% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 52.1% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 51.7% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 51.7% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 51.5% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 51.3% identity Open · Scan
M07565_2.00 NN 70-40% CisBP CCTCTGGGGGCTCGTCCA 51.0% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 51.0% identity Open · Scan
M01457_2.00 NN 70-40% CisBP GCGCACGGAC 50.9% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 50.9% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 50.8% identity Open · Scan
M07733_2.00 NN 70-40% CisBP TCTTTCTCTCTCTCC 50.5% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 50.5% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 50.4% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 50.4% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 50.1% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 50.1% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 499 aa
196-475

Region 196-475 0 PWM

Residues
280 aa
Domains
PF00096 · Zinc finger, C2H2 type PF13894 · C2H2-type zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 196-4751 model
Actions
Predicted = Low TFS_A8MUV8:196:475_5wjq_D_1 5wjq 196-475 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
4-44PF01352KRAB boxNo overlap with loaded model regions
200-222PF00096Zinc finger, C2H2 typeoverlaps 196-475
228-250PF13894C2H2-type zinc fingeroverlaps 196-475
340-362PF00096Zinc finger, C2H2 typeoverlaps 196-475
368-390PF00096Zinc finger, C2H2 typeoverlaps 196-475
396-418PF00096Zinc finger, C2H2 typeoverlaps 196-475
424-446PF00096Zinc finger, C2H2 typeoverlaps 196-475
452-474PF00096Zinc finger, C2H2 typeoverlaps 196-475