ModCRE DB

Transcription factor

B1ALC2 - ZNF618

Zinc finger protein 618

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 303 aa

6 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_B1ALC2_B1ALC2_HUMAN:156:180_1llm_D_1 ModCRE Homology model GGGCGCGCGCCA Region 156-180 · 1 3D model Open · Scan
TFS_tr_B1ALC2_B1ALC2_HUMAN:115:138_6ml2_A_1 ModCRE Homology model GGTCCTGCCGGG Region 115-138 · 1 3D model Open · Scan
TFS_tr_B1ALC2_B1ALC2_HUMAN:115:138_6ml3_A_1 ModCRE Homology model AGACCTTCCTAG Region 115-138 · 1 3D model Open · Scan
TFS_tr_B1ALC2_B1ALC2_HUMAN:115:138_6ml5_A_1 ModCRE Homology model AAGAATATTCTT Region 115-138 · 1 3D model Open · Scan
TFS_tr_B1ALC2_B1ALC2_HUMAN:115:138_6ml6_A_1 ModCRE Homology model GAACTACGTTCG Region 115-138 · 1 3D model Open · Scan
TFS_tr_B1ALC2_B1ALC2_HUMAN:115:138_6ml7_A_1 ModCRE Homology model TAGAATATTCTG Region 115-138 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 303 aa
115-138
156-180

Region 115-138 5 PWM

Residues
24 aa
Domains
PF00096 · Zinc finger, C2H2 type
3D models
5 active PDBs · 5 summary rows
Templates
6ML2, 6ML3, 6ML5, 6ML6, 6ML7
Sources
Predicted = Low
Scan this region Show models

Region 156-180 1 PWM

Residues
25 aa
Domains
PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB · 1 summary row
Templates
1LLM
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 115-1385 models · 5 summary rows
Actions
Predicted = Low TFS_tr_B1ALC2_B1ALC2_HUMAN:115:138_6ml2_A_1 6ml2 115-138 View model · PDB
Predicted = Low TFS_tr_B1ALC2_B1ALC2_HUMAN:115:138_6ml3_A_1 6ml3 115-138 View model · PDB
Predicted = Low TFS_tr_B1ALC2_B1ALC2_HUMAN:115:138_6ml5_A_1 6ml5 115-138 View model · PDB
Predicted = Low TFS_tr_B1ALC2_B1ALC2_HUMAN:115:138_6ml6_A_1 6ml6 115-138 View model · PDB
Predicted = Low TFS_tr_B1ALC2_B1ALC2_HUMAN:115:138_6ml7_A_1 6ml7 115-138 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 6ml3 114:140 115 138 P:A · DNA:E,F 45.8% / 62.5% 21 View · PDB TFS_tr_B1ALC2_B1ALC2_HUMAN:115:138_6ml3_A_1
2 6ml2 114:140 115 138 P:A · DNA:E,F 45.8% / 62.5% 17 View · PDB TFS_tr_B1ALC2_B1ALC2_HUMAN:115:138_6ml2_A_1
3 6ml5 114:140 115 138 P:A · DNA:E,F 45.8% / 62.5% 16 View · PDB TFS_tr_B1ALC2_B1ALC2_HUMAN:115:138_6ml5_A_1
4 6ml7 114:140 115 138 P:A · DNA:E,F 45.8% / 62.5% 16 View · PDB TFS_tr_B1ALC2_B1ALC2_HUMAN:115:138_6ml7_A_1
5 6ml6 114:140 115 138 P:A · DNA:E,F 45.8% / 62.5% 16 View · PDB TFS_tr_B1ALC2_B1ALC2_HUMAN:115:138_6ml6_A_1
Region 156-1801 model · 1 summary row
Actions
Predicted = Low DIMER_tr_B1ALC2_B1ALC2_HUMAN:156:180_1llm_D_1 1llm 156-180 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1llm 114:140 156,156 180,180 P:C,D · DNA:A,B 36.0% / 60.0% 28,29 View · PDB DIMER_tr_B1ALC2_B1ALC2_HUMAN:156:180_1llm_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
115-137PF00096Zinc finger, C2H2 typeoverlaps 115-138
156-178PF00096Zinc finger, C2H2 typeoverlaps 156-180