Transcription factor
B2R5R9
cDNA, FLJ92591, highly similar to Homo sapiens regulatory factor X, 5 (influences HLA class IIexpression) (RFX5), mRNA
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 616 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M05727_2.00 | Known | CisBP | GGTTGCTAGGCGTTGCTAG | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
AF3 model assignments
Validated exact-accession AF3 models stored in local staging. Confidence artifacts are indexed but not visualized yet.
1 active AF3 model
AF3 model assignments
Validated exact-accession AF3 models stored in local staging. Confidence artifacts are indexed but not visualized yet.
| Type | Model | Residues / fragment | Interface | Confidence files | Actions |
|---|---|---|---|---|---|
| AF3 full-length model | B2R5R9_model.cif | Full sequence | PASS_NONEMPTY_PROTEIN_DNA_INTERFACE | 3 indexed | View model · mmCIF |
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain |
|---|---|---|
| 28-86 | PF18326 | RFX5 N-terminal domain |
| 91-167 | PF02257 | RFX DNA-binding domain |
| 396-614 | PF14621 | RFX5 DNA-binding domain |