Transcription factor

B2R8K4

cDNA, FLJ93942, highly similar to Homo sapiens activating transcription factor 1 (ATF1), mRNA

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 271 aa

8 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3

Motif	Prediction	Source	DNA binding	Support	Actions
M09485_2.00	NN 70+%	CisBP	GATGACGTCA	99.2% identity	Open · Scan
MA0604.1	NN 70+%	JASPAR	ATGACGTA	90.4% identity	Open · Scan
M03660_2.00	NN 70+%	CisBP	ATGACGTCAT	84.2% identity	Open · Scan

Nearest Neighbor (70% - 40%)5

Motif	Prediction	Source	DNA binding	Support	Actions
M01806_2.00	NN 70-40%	CisBP	GTGACGTAA	67.4% identity	Open · Scan
MA0018.1	NN 70-40%	JASPAR	CCTGGTGACGTC	67.4% identity	Open · Scan
MA0609.2	NN 70-40%	JASPAR	GCAGTGACGTCACTGC	55.2% identity	Open · Scan
MA0609.1	NN 70-40%	JASPAR	TATGACGTAA	54.8% identity	Open · Scan
M06790_2.00	NN 70-40%	CisBP	AATGATGACGTGGCC	50.0% identity	Open · Scan

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 271 aa

207-262

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 207-2621 model

				Actions
Predicted = Low	DIMER_B2R8K4:207:262_2wty_A_1	2wty	207-262	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
43-83	PF02173	pKID domain	No overlap with loaded model regions
212-268	PF00170	bZIP transcription factor	overlaps 207-262