ModCRE DB

Transcription factor

B2R8P9

cDNA, FLJ94004, highly similar to Homo sapiens Kruppel-like factor 3 (basic) (KLF3), mRNA

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 345 aa

76 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)16
MotifPredictionSourceDNA bindingSupportLogoActions
MA1516.1 NN 70+% JASPAR GACCACGCCCA 99.7% identity Open · Scan
M04430_2.00 NN 70+% CisBP GACCACGCCCA 90.7% identity Open · Scan
MA0599.1 NN 70+% JASPAR GCCCCGCCCC 83.6% identity Open · Scan
M00779_2.00 NN 70+% CisBP GCCACGCCCA 82.9% identity Open · Scan
M08867_2.00 NN 70+% CisBP CACCCCCTG 82.9% identity Open · Scan
MA1515.1 NN 70+% JASPAR CACCACGCCCA 79.7% identity Open · Scan
M00134_2.00 NN 70+% CisBP GCCACGCCCA 79.1% identity Open · Scan
MA1517.1 NN 70+% JASPAR GGCCACGCCCA 77.6% identity Open · Scan
M00224_2.00 NN 70+% CisBP CCCGCCCC 76.1% identity Open · Scan
M06169_2.00 NN 70+% CisBP GCCACGCCCAAC 74.7% identity Open · Scan
M09008_2.00 NN 70+% CisBP CCCGGCCCCACCCT 73.8% identity Open · Scan
MA0493.1 NN 70+% JASPAR GGCCACACCCA 72.6% identity Open · Scan
M00617_2.00 NN 70+% CisBP CCACGCCCA 71.4% identity Open · Scan
M04463_2.00 NN 70+% CisBP CACCACGCCCA 70.5% identity Open · Scan
MA0039.1 NN 70+% JASPAR TAAAGGAAGG 70.5% identity Open · Scan
MA0039.3 NN 70+% JASPAR CCACACCCTGC 70.5% identity Open · Scan
Nearest Neighbor (70% - 40%)60
MotifPredictionSourceDNA bindingSupportLogoActions
M04555_2.00 NN 70-40% CisBP GCCACGCCCCCGCCACGCCCAC 65.9% identity Open · Scan
MA1512.1 NN 70-40% JASPAR GCCACGCCCAC 65.9% identity Open · Scan
M00777_2.00 NN 70-40% CisBP ACCGTTAT 65.0% identity Open · Scan
MA1107.1 NN 70-40% JASPAR GGCCACACCCACC 65.0% identity Open · Scan
MA0741.1 NN 70-40% JASPAR GCCACGCCCCC 63.8% identity Open · Scan
MA1513.1 NN 70-40% JASPAR GCCCCGCCCCC 63.5% identity Open · Scan
MA0740.1 NN 70-40% JASPAR GGCCACGCCCCCTT 61.4% identity Open · Scan
M00645_2.00 NN 70-40% CisBP CGCCCACGCA 60.8% identity Open · Scan
M06072_2.00 NN 70-40% CisBP CCACGCCCACGCAC 60.6% identity Open · Scan
M09515_2.00 NN 70-40% CisBP CCCGCCCACGCA 60.6% identity Open · Scan
MA0472.1 NN 70-40% JASPAR CCCCCGCCCACGCAC 60.6% identity Open · Scan
MA0472.2 NN 70-40% JASPAR ACGCCCACGCA 60.6% identity Open · Scan
M03682_2.00 NN 70-40% CisBP ACGCCACGCCCAGT 60.2% identity Open · Scan
M02903_2.00 NN 70-40% CisBP ATGCCACGCCCCTTTTTG 59.6% identity Open · Scan
M01447_2.00 NN 70-40% CisBP TACCCCTGA 59.5% identity Open · Scan
MA0162.1 NN 70-40% JASPAR TGCGTGGGCGG 59.0% identity Open · Scan
MA0162.2 NN 70-40% JASPAR CCCCCGCCCCCGCC 59.0% identity Open · Scan
MA1514.1 NN 70-40% JASPAR CACCACGCACCCCTT 58.0% identity Open · Scan
M01538_2.00 NN 70-40% CisBP GCCCCTGA 57.4% identity Open · Scan
MA0079.1 NN 70-40% JASPAR GGGGCGGGGT 57.4% identity Open · Scan
M01529_2.00 NN 70-40% CisBP CCCCGCATT 57.1% identity Open · Scan
M01883_2.00 NN 70-40% CisBP TGCCCCTGA 57.1% identity Open · Scan
MA0747.1 NN 70-40% JASPAR GCCACGCCCACT 56.8% identity Open · Scan
MA1564.1 NN 70-40% JASPAR GCCACGCCCCCC 56.8% identity Open · Scan
M06122_2.00 NN 70-40% CisBP GATACGCCCCCTAA 56.7% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 56.5% identity Open · Scan
M00765_2.00 NN 70-40% CisBP CCCGCCCCC 56.3% identity Open · Scan
M05859_2.00 NN 70-40% CisBP GGCCACGCCCACT 56.3% identity Open · Scan
MA0685.1 NN 70-40% JASPAR TAAGCCACGCCCCCTTT 56.3% identity Open · Scan
MA0746.1 NN 70-40% JASPAR GCCACGCCCCC 56.3% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 55.7% identity Open · Scan
M06135_2.00 NN 70-40% CisBP CAGCCACGCCCACCT 55.5% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 55.2% identity Open · Scan
M00632_2.00 NN 70-40% CisBP ACACGCCCCT 55.1% identity Open · Scan
M01042_2.00 NN 70-40% CisBP TGGGACCTGA 54.3% identity Open · Scan
M08968_2.00 NN 70-40% CisBP CCCCCCCTCCTCCCCCGCCC 54.0% identity Open · Scan
MA1627.1 NN 70-40% JASPAR CCCCTCCCCCACAC 54.0% identity Open · Scan
M00249_2.00 NN 70-40% CisBP ACTCCCCCGCA 53.9% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 53.9% identity Open · Scan
M00647_2.00 NN 70-40% CisBP CCCCCCC 53.5% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 52.6% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 52.6% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 52.6% identity Open · Scan
M08525_2.00 NN 70-40% CisBP CCCCGCA 52.5% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 51.3% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 51.3% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 51.3% identity Open · Scan
M08246_2.00 NN 70-40% CisBP GCCCCACCCA 51.1% identity Open · Scan
MA1511.1 NN 70-40% JASPAR GCCACACCCCC 51.1% identity Open · Scan
M06466_2.00 NN 70-40% CisBP TCCGCCCCCT 51.0% identity Open · Scan
M00954_2.00 NN 70-40% CisBP CTACCCTA 50.6% identity Open · Scan
M01445_2.00 NN 70-40% CisBP ACACGCCGT 50.5% identity Open · Scan
M00021_2.00 NN 70-40% CisBP TACCCCACAC 50.0% identity Open · Scan
M01180_2.00 NN 70-40% CisBP ACCCCTGG 50.0% identity Open · Scan
M01440_2.00 NN 70-40% CisBP TACGCCAC 50.0% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 50.0% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 50.0% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 50.0% identity Open · Scan
MA0516.1 NN 70-40% JASPAR GCCCCGCCCCCTCCC 50.0% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 345 aa
258-343

Region 258-343 0 PWM

Residues
86 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
1A1G
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 258-3431 model
Actions
Predicted = Low TFS_B2R8P9:258:343_1a1g_A_1 1a1g 258-343 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
260-284PF00096Zinc finger, C2H2 typeoverlaps 258-343
290-314PF00096Zinc finger, C2H2 typeoverlaps 258-343
320-342PF00096Zinc finger, C2H2 typeoverlaps 258-343