ModCRE DB

Transcription factor

B2RC57

cDNA, FLJ95861, highly similar to Homo sapiens Meis1, myeloid ecotropic viral integration site 1homolog (mouse) (MEIS1), mRNA

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 390 aa

21 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)4
MotifPredictionSourceDNA bindingSupportLogoActions
MA0498.2 NN 70+% JASPAR TTGACAG 99.7% identity Open · Scan
M03165_2.00 NN 70+% CisBP TTGACAG 99.4% identity Open · Scan
MA0498.1 NN 70+% JASPAR AGCTGTCACTCACCT 99.4% identity Open · Scan
MA0774.1 NN 70+% JASPAR TTGACAGC 83.5% identity Open · Scan
Nearest Neighbor (70% - 40%)17
MotifPredictionSourceDNA bindingSupportLogoActions
MA0775.1 NN 70-40% JASPAR TTGACAGG 64.4% identity Open · Scan
M04951_2.00 NN 70-40% CisBP TGACAGCTGTCA 64.1% identity Open · Scan
M06335_2.00 NN 70-40% CisBP ATGATACC 55.5% identity Open · Scan
M02168_2.00 NN 70-40% CisBP TTGACATGT 54.2% identity Open · Scan
M06490_2.00 NN 70-40% CisBP TGACAG 53.7% identity Open · Scan
M02161_2.00 NN 70-40% CisBP TGACATGT 53.4% identity Open · Scan
M02057_2.00 NN 70-40% CisBP ATTGACACGT 52.9% identity Open · Scan
M00276_2.00 NN 70-40% CisBP ACTAATTAATT 51.7% identity Open · Scan
M02054_2.00 NN 70-40% CisBP CATCTCAATCA 51.6% identity Open · Scan
M03859_2.00 NN 70-40% CisBP TGACAG 51.6% identity Open · Scan
M06346_2.00 NN 70-40% CisBP TTGACA 51.6% identity Open · Scan
M08208_2.00 NN 70-40% CisBP GAGTTGTAGT 51.6% identity Open · Scan
M08574_2.00 NN 70-40% CisBP TTTGACAG 50.8% identity Open · Scan
M02064_2.00 NN 70-40% CisBP ATTACAAG 50.0% identity Open · Scan
M05364_2.00 NN 70-40% CisBP TTGATTGATG 50.0% identity Open · Scan
M08422_2.00 NN 70-40% CisBP ACACAAT 50.0% identity Open · Scan
MA0070.1 NN 70-40% JASPAR CCATCAATCAAA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 390 aa
272-335

Region 272-335 0 PWM

Residues
64 aa
Domains
PF05920 · Homeobox KN domain
3D models
1 active PDB
Templates
6FQP
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 272-3351 model
Actions
Predicted = Low DIMER_B2RC57:272:335_6fqp_B_1 6fqp 272-335 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
71-184PF16493TALE/MEIS homeobox family N-terminal domainNo overlap with loaded model regions
290-329PF05920Homeobox KN domainoverlaps 272-335