Region 102-166 0 PWM
- Residues
- 65 aa
- Domains
- PF01586 · Myogenic Basic domain PF00010 · Helix-loop-helix DNA-binding domain
- 3D models
- 1 active PDB
- Templates
- 1MDY
- Sources
- Structure model
Transcription factor
B2RC72
Myogenic factor
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 320 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)5
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| MA0499.2 | NN 70+% | JASPAR | CAGCACCTGTCCC | 99.6% identity | Open · Scan | |
| MA0499.1 | NN 70+% | JASPAR | TGCAGCTGTCCCT | 87.8% identity | Open · Scan | |
| MA0500.1 | NN 70+% | JASPAR | GACAGCTGCAG | 74.0% identity | Open · Scan | |
| M00743_2.00 | NN 70+% | CisBP | AGCACGTGTC | 71.6% identity | Open · Scan | |
| M03602_2.00 | NN 70+% | CisBP | GCGACAGCTGTCGC | 70.6% identity | Open · Scan |
Nearest Neighbor (70% - 40%)4
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M00120_2.00 | NN 70-40% | CisBP | ACACCTGTC | 68.0% identity | Open · Scan | |
| MA0667.1 | NN 70-40% | JASPAR | AACAGCTGTT | 68.0% identity | Open · Scan | |
| MA0500.2 | NN 70-40% | JASPAR | CAGCAGCTGCTG | 67.7% identity | Open · Scan | |
| MA1641.1 | NN 70-40% | JASPAR | GAACAGCTGTTC | 50.3% identity | Open · Scan |
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
320 aa
102-166
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 102-1661 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | DIMER_B2RC72:102:166_1mdy_A_1 | 1mdy | 102-166 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 27-109 | PF01586 | Myogenic Basic domain | overlaps 102-166 |
| 110-161 | PF00010 | Helix-loop-helix DNA-binding domain | overlaps 102-166 |
| 191-259 | PF12232 | Myogenic determination factor 5 | No overlap with loaded model regions |