ModCRE DB

Transcription factor

B2RCE4

Zinc finger protein 345

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 488 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M04653_2.00 Known CisBP GGTACGGTTGTCCATGTTGCAA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 488 aa
174-334

Region 174-334 0 PWM

Residues
161 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF13465 · Zinc-finger double domain PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5T0U
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 174-3341 model
Actions
Predicted = Low TFS_B2RCE4:174:334_5t0u_A_1 5t0u 174-334 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
63-84PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
90-112PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
118-140PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
146-168PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
174-196PF00096Zinc finger, C2H2 typeoverlaps 174-334
202-224PF00096Zinc finger, C2H2 typeoverlaps 174-334
230-252PF00096Zinc finger, C2H2 typeoverlaps 174-334
272-297PF13465Zinc-finger double domainoverlaps 174-334
314-336PF00096Zinc finger, C2H2 typeoverlaps 174-334
342-364PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
370-392PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
412-436PF13465Zinc-finger double domainNo overlap with loaded model regions
454-476PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions