ModCRE DB

Transcription factor

B2RCZ6

cDNA, FLJ96388, highly similar to Homo sapiens TGFB inducible early growth response 2 (TIEG2), mRNA

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 512 aa

63 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)7
MotifPredictionSourceDNA bindingSupportLogoActions
MA1512.1 NN 70+% JASPAR GCCACGCCCAC 99.6% identity Open · Scan
M04555_2.00 NN 70+% CisBP GCCACGCCCCCGCCACGCCCAC 99.5% identity Open · Scan
M02903_2.00 NN 70+% CisBP ATGCCACGCCCCTTTTTG 80.7% identity Open · Scan
MA0741.1 NN 70+% JASPAR GCCACGCCCCC 76.5% identity Open · Scan
MA0657.1 NN 70+% JASPAR ATGCCACGCCCCTTTTTG 75.0% identity Open · Scan
M00777_2.00 NN 70+% CisBP ACCGTTAT 72.8% identity Open · Scan
MA1107.1 NN 70+% JASPAR GGCCACACCCACC 72.8% identity Open · Scan
Nearest Neighbor (70% - 40%)56
MotifPredictionSourceDNA bindingSupportLogoActions
MA0747.1 NN 70-40% JASPAR GCCACGCCCACT 69.1% identity Open · Scan
MA1564.1 NN 70-40% JASPAR GCCACGCCCCCC 69.1% identity Open · Scan
MA1515.1 NN 70-40% JASPAR CACCACGCCCA 67.0% identity Open · Scan
MA1517.1 NN 70-40% JASPAR GGCCACGCCCA 67.0% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 66.6% identity Open · Scan
M03682_2.00 NN 70-40% CisBP ACGCCACGCCCAGT 65.9% identity Open · Scan
M04430_2.00 NN 70-40% CisBP GACCACGCCCA 65.9% identity Open · Scan
MA0742.1 NN 70-40% JASPAR GACCACGCCCTTATT 65.9% identity Open · Scan
MA1516.1 NN 70-40% JASPAR GACCACGCCCA 65.9% identity Open · Scan
MA0039.1 NN 70-40% JASPAR TAAAGGAAGG 65.5% identity Open · Scan
MA0039.3 NN 70-40% JASPAR CCACACCCTGC 65.5% identity Open · Scan
MA0599.1 NN 70-40% JASPAR GCCCCGCCCC 65.5% identity Open · Scan
M00617_2.00 NN 70-40% CisBP CCACGCCCA 64.7% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 64.5% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 64.5% identity Open · Scan
MA0740.1 NN 70-40% JASPAR GGCCACGCCCCCTT 64.0% identity Open · Scan
M09008_2.00 NN 70-40% CisBP CCCGGCCCCACCCT 63.6% identity Open · Scan
MA0493.1 NN 70-40% JASPAR GGCCACACCCA 63.6% identity Open · Scan
M05859_2.00 NN 70-40% CisBP GGCCACGCCCACT 61.5% identity Open · Scan
M06169_2.00 NN 70-40% CisBP GCCACGCCCAAC 61.5% identity Open · Scan
M06135_2.00 NN 70-40% CisBP CAGCCACGCCCACCT 60.9% identity Open · Scan
M00632_2.00 NN 70-40% CisBP ACACGCCCCT 60.4% identity Open · Scan
MA0685.1 NN 70-40% JASPAR TAAGCCACGCCCCCTTT 60.4% identity Open · Scan
MA0746.1 NN 70-40% JASPAR GCCACGCCCCC 60.4% identity Open · Scan
M00224_2.00 NN 70-40% CisBP CCCGCCCC 59.1% identity Open · Scan
M08525_2.00 NN 70-40% CisBP CCCCGCA 58.8% identity Open · Scan
MA0516.1 NN 70-40% JASPAR GCCCCGCCCCCTCCC 57.6% identity Open · Scan
M00765_2.00 NN 70-40% CisBP CCCGCCCCC 57.5% identity Open · Scan
M01529_2.00 NN 70-40% CisBP CCCCGCATT 57.1% identity Open · Scan
M06122_2.00 NN 70-40% CisBP GATACGCCCCCTAA 56.4% identity Open · Scan
MA0079.1 NN 70-40% JASPAR GGGGCGGGGT 55.5% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 55.1% identity Open · Scan
M01039_2.00 NN 70-40% CisBP CCCCCTA 55.1% identity Open · Scan
M00249_2.00 NN 70-40% CisBP ACTCCCCCGCA 54.5% identity Open · Scan
M08968_2.00 NN 70-40% CisBP CCCCCCCTCCTCCCCCGCCC 54.5% identity Open · Scan
MA1627.1 NN 70-40% JASPAR CCCCTCCCCCACAC 54.5% identity Open · Scan
M06112_2.00 NN 70-40% CisBP CTACTTTCACCGGGG 54.2% identity Open · Scan
M06466_2.00 NN 70-40% CisBP TCCGCCCCCT 53.8% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 53.1% identity Open · Scan
M04463_2.00 NN 70-40% CisBP CACCACGCCCA 53.1% identity Open · Scan
M10391_2.00 NN 70-40% CisBP TACCCCACATTTATTTA 52.9% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 52.6% identity Open · Scan
M00951_2.00 NN 70-40% CisBP GCTGCACG 51.8% identity Open · Scan
MA1513.1 NN 70-40% JASPAR GCCCCGCCCCC 51.5% identity Open · Scan
M00954_2.00 NN 70-40% CisBP CTACCCTA 51.4% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 51.3% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 51.3% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 51.2% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 51.2% identity Open · Scan
M01457_2.00 NN 70-40% CisBP GCGCACGGAC 51.1% identity Open · Scan
M08301_2.00 NN 70-40% CisBP CTCCCATCC 51.1% identity Open · Scan
M01445_2.00 NN 70-40% CisBP ACACGCCGT 50.5% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 50.0% identity Open · Scan
M01432_2.00 NN 70-40% CisBP GACGCCAC 50.0% identity Open · Scan
M01538_2.00 NN 70-40% CisBP GCCCCTGA 50.0% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 512 aa
390-476

Region 390-476 0 PWM

Residues
87 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5KE9
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 390-4761 model
Actions
Predicted = Low TFS_B2RCZ6:390:476_5ke9_A_1 5ke9 390-476 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
394-418PF00096Zinc finger, C2H2 typeoverlaps 390-476
424-448PF00096Zinc finger, C2H2 typeoverlaps 390-476
454-476PF00096Zinc finger, C2H2 typeoverlaps 390-476