ModCRE DB

Transcription factor

B2RE18

Zinc finger protein 2 (Zinc finger protein 661)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 292 aa

118 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)114
MotifPredictionSourceDNA bindingSupportLogoActions
M00939_2.00 NN 70-40% CisBP CCACCTCA 67.0% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 64.5% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 62.1% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 62.0% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 61.3% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 61.1% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 61.0% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 60.9% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 60.2% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 60.0% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 59.8% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 59.8% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 59.5% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 59.4% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 59.2% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 59.2% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 59.2% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 59.0% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 59.0% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 58.8% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 58.8% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 58.8% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 58.8% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 58.8% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 58.8% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 58.8% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 58.0% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 57.9% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 57.9% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 57.8% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 57.7% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 57.6% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 57.6% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 57.3% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 57.1% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 57.1% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 57.1% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 56.9% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 56.9% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 56.9% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 56.8% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 56.8% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 56.7% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 56.6% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 56.5% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 56.5% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 56.4% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 56.3% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 56.3% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 56.3% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 55.7% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 55.6% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 55.5% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 55.5% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 55.5% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 55.2% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 55.1% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 55.1% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 55.1% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 54.9% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 54.9% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 54.8% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 54.8% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 54.7% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 54.7% identity Open · Scan
M07693_2.00 NN 70-40% CisBP CTCCTGTGTGTGCCTTGGCTG 54.5% identity Open · Scan
M07740_2.00 NN 70-40% CisBP TCCTGATTCCACACTCAAACATAACTTT 54.4% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 54.3% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 54.3% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 54.2% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 54.1% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 54.0% identity Open · Scan
M07754_2.00 NN 70-40% CisBP CGCCCCCTCCCT 54.0% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 53.7% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 53.7% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 53.6% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 53.6% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 53.5% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 53.4% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 53.4% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 53.2% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 53.1% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 53.0% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 52.8% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 52.8% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 52.7% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 52.7% identity Open · Scan
M07691_2.00 NN 70-40% CisBP CCTGCAGCCACCTTGGCCTTG 52.7% identity Open · Scan
MA0056.1 NN 70-40% JASPAR TGGGGA 52.6% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 52.6% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 52.4% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 52.4% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 52.4% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 52.4% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 52.3% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 52.2% identity Open · Scan
M07746_2.00 NN 70-40% CisBP CAGCTGGCGCCCAACATGGGTCCC 52.2% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 52.1% identity Open · Scan
M07770_2.00 NN 70-40% CisBP CTTGGACTT 52.0% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 52.0% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 52.0% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 51.8% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 51.6% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 51.1% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 51.0% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 51.0% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 50.7% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 50.5% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 50.4% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 50.2% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 50.1% identity Open · Scan
M08386_2.00 NN 70-40% CisBP GCCTTAAAAGCTCAGCAC 50.1% identity Open · Scan
M00019_2.00 NN 70-40% CisBP ACCCCTAATT 50.0% identity Open · Scan
M07723_2.00 NN 70-40% CisBP CCGCTGCTCCCTGCT 50.0% identity Open · Scan
ModCRE4
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_B2RE18_B2RE18_HUMAN:106:258_2i13_A_1 ModCRE Homology model AATTGCCTGCTTACTCGTCAA Region 106-258 · 1 3D model Open · Scan
TFS_tr_B2RE18_B2RE18_HUMAN:28:259_5v3j_E_1 ModCRE Homology model CGGTGTCAGGCCACCCCCCCCGGGGT Region 28-259 · 1 3D model Open · Scan
TFS_tr_B2RE18_B2RE18_HUMAN:28:259_5v3m_C_1 ModCRE Homology model CCCCCCGGACGCCCCCACCGCGGGGG Region 28-259 · 1 3D model Open · Scan
TFS_tr_B2RE18_B2RE18_HUMAN:28:284_5wjq_D_1 ModCRE Homology model CCCGCCCCCCCCGCCCCCCGCCGCCCCC Region 28-284 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 292 aa
25-286

Region 25-286 4 PWM

Residues
262 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 25-2866 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_B2RE18_B2RE18_HUMAN:234:283_1llm_D_1 1llm 234-283 View model · PDB
Predicted = Low TFS_tr_B2RE18_B2RE18_HUMAN:106:258_2i13_A_1 2i13 106-258 View model · PDB
Predicted = Low TFS_tr_B2RE18_B2RE18_HUMAN:25:286_7w1m_H_1 7w1m 25-286 View model · PDB
Predicted = Low TFS_tr_B2RE18_B2RE18_HUMAN:28:259_5v3j_E_1 5v3j 28-259 View model · PDB
Predicted = Low TFS_tr_B2RE18_B2RE18_HUMAN:28:259_5v3m_C_1 5v3m 28-259 View model · PDB
Predicted = Low TFS_tr_B2RE18_B2RE18_HUMAN:28:284_5wjq_D_1 5wjq 28-284 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 25:286 106 258 P:A · DNA:C,D 55.2% / 69.5% 99 View · PDB TFS_tr_B2RE18_B2RE18_HUMAN:106:258_2i13_A_1
1 5wjq 25:286 28 284 P:D · DNA:A,B 53.7% / 67.3% 91 View · PDB TFS_tr_B2RE18_B2RE18_HUMAN:28:284_5wjq_D_1
2 5v3m 25:286 28 259 P:C · DNA:A,B 53.4% / 67.7% 83 View · PDB TFS_tr_B2RE18_B2RE18_HUMAN:28:259_5v3m_C_1
3 5v3j 25:286 28 259 P:E · DNA:A,B 53.4% / 67.7% 83 View · PDB TFS_tr_B2RE18_B2RE18_HUMAN:28:259_5v3j_E_1
1 1llm 25:286 234,234 283,283 P:C,D · DNA:A,B 44.0% / 62.0% 57,58 View · PDB DIMER_tr_B2RE18_B2RE18_HUMAN:234:283_1llm_D_1
5 7w1m 25:286 25 286 P:H · DNA:F,G 39.0% / 51.7% 81 View · PDB TFS_tr_B2RE18_B2RE18_HUMAN:25:286_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
41-62PF00096Zinc finger, C2H2 typeoverlaps 25-286
68-90PF00096Zinc finger, C2H2 typeoverlaps 25-286
96-118PF00096Zinc finger, C2H2 typeoverlaps 25-286
124-146PF00096Zinc finger, C2H2 typeoverlaps 25-286
152-174PF00096Zinc finger, C2H2 typeoverlaps 25-286
180-202PF00096Zinc finger, C2H2 typeoverlaps 25-286
208-230PF00096Zinc finger, C2H2 typeoverlaps 25-286
236-258PF00096Zinc finger, C2H2 typeoverlaps 25-286
264-285PF00096Zinc finger, C2H2 typeoverlaps 25-286