Region 173-289 2 PWM
- Residues
- 117 aa
- Domains
- PF10523 · BEN domain
- 3D models
- 2 active PDBs · 2 summary rows
- Templates
- 7YUK, 8HTX
- Sources
- Predicted = Low
Transcription factor
B3KM38
Protein BANP (Btg3-associated nuclear protein) (Scaffold/matrix-associated region-1-binding protein)
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 465 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE2
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_tr_B3KM38_B3KM38_HUMAN:173:289_8htx_A_1 | ModCRE | Homology model | CCCCCTTTCGC | Region 173-289 · 1 3D model | Open · Scan | |
| TFS_tr_B3KM38_B3KM38_HUMAN:174:289_7yuk_A_1 | ModCRE | Homology model | CCCCCCTTCGCG | Region 174-289 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
465 aa
173-289
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
2 active PDB models
2 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 173-2892 models · 2 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_tr_B3KM38_B3KM38_HUMAN:173:289_8htx_A_1 | 8htx | 173-289 | View model · PDB |
| Predicted = Low | TFS_tr_B3KM38_B3KM38_HUMAN:174:289_7yuk_A_1 | 7yuk | 174-289 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 1 | 8htx | 173:289 | 173 | 289 | P:A · DNA:C,D | 100.0% / 100.0% | 100 | View · PDB TFS_tr_B3KM38_B3KM38_HUMAN:173:289_8htx_A_1 |
| 2 | 7yuk | 173:289 | 174 | 289 | P:A · DNA:C,D | 100.0% / 100.0% | 100 | View · PDB TFS_tr_B3KM38_B3KM38_HUMAN:174:289_7yuk_A_1 |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 215-284 | PF10523 | BEN domain | overlaps 173-289 |