ModCRE DB

Transcription factor

B3KMZ4

Zinc finger protein 112

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 907 aa

104 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M00960_2.00 NN 70+% CisBP TGCATCCC 70.5% identity Open · Scan
Nearest Neighbor (70% - 40%)103
MotifPredictionSourceDNA bindingSupportLogoActions
M00952_2.00 NN 70-40% CisBP GGATGCTC 69.4% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 69.4% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 68.2% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 68.2% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 67.0% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 65.8% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 65.8% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 64.7% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 62.8% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 62.2% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 61.5% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 60.1% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 60.0% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 60.0% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 60.0% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 59.6% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 59.3% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 58.5% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 57.5% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 57.5% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 57.2% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 56.8% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 56.7% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 56.5% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 56.4% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 56.3% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 56.0% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 55.8% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 55.7% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 55.6% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 55.6% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 55.5% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 55.2% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 55.0% identity Open · Scan
M08949_2.00 NN 70-40% CisBP TTCTATTTCTTCTTGTGTCA 55.0% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 54.9% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 54.9% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 54.7% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 54.6% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 54.5% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 54.2% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 54.2% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 54.1% identity Open · Scan
M07715_2.00 NN 70-40% CisBP CCGCCGCCGCCGTGG 54.1% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 54.0% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 53.8% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 53.7% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 53.6% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 53.6% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 53.5% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 53.5% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 53.4% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 53.4% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 53.3% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 52.9% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 52.7% identity Open · Scan
MA1599.1 NN 70-40% JASPAR CGGGCCAAGCCCCTAT 52.7% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 52.6% identity Open · Scan
M07685_2.00 NN 70-40% CisBP CTTTCCAGCCAC 52.6% identity Open · Scan
M04430_2.00 NN 70-40% CisBP GACCACGCCCA 52.5% identity Open · Scan
M07586_2.00 NN 70-40% CisBP GGGACCCGGGTGGGGGCGTCCCCC 52.5% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 52.5% identity Open · Scan
MA0742.1 NN 70-40% JASPAR GACCACGCCCTTATT 52.5% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 52.3% identity Open · Scan
M07633_2.00 NN 70-40% CisBP CTCTCGTTGTGCCTTTGCCAT 52.2% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 52.2% identity Open · Scan
M08921_2.00 NN 70-40% CisBP CCTCATTCTTCTTGGACATG 52.2% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 52.1% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 52.1% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 52.1% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 52.0% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 52.0% identity Open · Scan
M07679_2.00 NN 70-40% CisBP TGCGATCTC 51.9% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 51.9% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 51.7% identity Open · Scan
M07754_2.00 NN 70-40% CisBP CGCCCCCTCCCT 51.7% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 51.7% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 51.6% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 51.6% identity Open · Scan
M08381_2.00 NN 70-40% CisBP ACATTTTGTCCTCCTAGTCCT 51.6% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 51.6% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 51.5% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 51.5% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 51.3% identity Open · Scan
MA0740.1 NN 70-40% JASPAR GGCCACGCCCCCTT 51.3% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 51.2% identity Open · Scan
M07657_2.00 NN 70-40% CisBP CCCCTGCATGTCCCCATTTTT 51.2% identity Open · Scan
M08234_2.00 NN 70-40% CisBP GTCAACTTGACTGGGCCA 51.2% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 51.2% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 51.2% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 51.2% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 51.1% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 51.1% identity Open · Scan
M00774_2.00 NN 70-40% CisBP TTAGTATACACAAGT 51.0% identity Open · Scan
M07723_2.00 NN 70-40% CisBP CCGCTGCTCCCTGCT 50.8% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 50.6% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 50.5% identity Open · Scan
M08330_2.00 NN 70-40% CisBP TGGGTGCCGGACTGCTGTTCC 50.3% identity Open · Scan
M02913_2.00 NN 70-40% CisBP TTCGTGGCATTTTTCTA 50.2% identity Open · Scan
M07662_2.00 NN 70-40% CisBP CCTGTGTCCTCCCTGGTCCCC 50.2% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 50.1% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 50.0% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 907 aa
516-793

Region 516-793 0 PWM

Residues
278 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 516-7931 model
Actions
Predicted = Low TFS_B3KMZ4:516:793_5wjq_D_1 5wjq 516-793 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
1-41PF01352KRAB boxNo overlap with loaded model regions
519-541PF00096Zinc finger, C2H2 typeoverlaps 516-793
547-569PF00096Zinc finger, C2H2 typeoverlaps 516-793
575-597PF00096Zinc finger, C2H2 typeoverlaps 516-793
603-625PF00096Zinc finger, C2H2 typeoverlaps 516-793
631-653PF00096Zinc finger, C2H2 typeoverlaps 516-793
659-681PF00096Zinc finger, C2H2 typeoverlaps 516-793
687-709PF00096Zinc finger, C2H2 typeoverlaps 516-793
715-737PF00096Zinc finger, C2H2 typeoverlaps 516-793
743-765PF00096Zinc finger, C2H2 typeoverlaps 516-793
771-793PF00096Zinc finger, C2H2 typeoverlaps 516-793
799-821PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
827-849PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions