ModCRE DB

Transcription factor

B3KNE6

Krueppel-like factor 7

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 302 aa

76 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)14
MotifPredictionSourceDNA bindingSupportLogoActions
M00134_2.00 NN 70+% CisBP GCCACGCCCA 96.5% identity Open · Scan
MA0599.1 NN 70+% JASPAR GCCCCGCCCC 82.7% identity Open · Scan
M06169_2.00 NN 70+% CisBP GCCACGCCCAAC 77.9% identity Open · Scan
MA1516.1 NN 70+% JASPAR GACCACGCCCA 77.7% identity Open · Scan
M00224_2.00 NN 70+% CisBP CCCGCCCC 77.6% identity Open · Scan
M09008_2.00 NN 70+% CisBP CCCGGCCCCACCCT 77.6% identity Open · Scan
M04430_2.00 NN 70+% CisBP GACCACGCCCA 76.8% identity Open · Scan
MA0742.1 NN 70+% JASPAR GACCACGCCCTTATT 76.8% identity Open · Scan
MA0493.1 NN 70+% JASPAR GGCCACACCCA 76.4% identity Open · Scan
M04463_2.00 NN 70+% CisBP CACCACGCCCA 72.5% identity Open · Scan
MA0039.1 NN 70+% JASPAR TAAAGGAAGG 72.5% identity Open · Scan
MA0039.3 NN 70+% JASPAR CCACACCCTGC 72.5% identity Open · Scan
MA1515.1 NN 70+% JASPAR CACCACGCCCA 72.5% identity Open · Scan
M00617_2.00 NN 70+% CisBP CCACGCCCA 71.4% identity Open · Scan
Nearest Neighbor (70% - 40%)62
MotifPredictionSourceDNA bindingSupportLogoActions
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 69.4% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 69.4% identity Open · Scan
M08246_2.00 NN 70-40% CisBP GCCCCACCCA 67.4% identity Open · Scan
MA1511.1 NN 70-40% JASPAR GCCACACCCCC 67.4% identity Open · Scan
M04555_2.00 NN 70-40% CisBP GCCACGCCCCCGCCACGCCCAC 64.7% identity Open · Scan
MA1512.1 NN 70-40% JASPAR GCCACGCCCAC 64.7% identity Open · Scan
MA0740.1 NN 70-40% JASPAR GGCCACGCCCCCTT 62.6% identity Open · Scan
MA0162.1 NN 70-40% JASPAR TGCGTGGGCGG 62.5% identity Open · Scan
MA0162.2 NN 70-40% JASPAR CCCCCGCCCCCGCC 62.5% identity Open · Scan
MA0732.1 NN 70-40% JASPAR CTACGCCCACGCACT 62.5% identity Open · Scan
MA1513.1 NN 70-40% JASPAR GCCCCGCCCCC 62.3% identity Open · Scan
MA0657.1 NN 70-40% JASPAR ATGCCACGCCCCTTTTTG 61.7% identity Open · Scan
M00777_2.00 NN 70-40% CisBP ACCGTTAT 61.4% identity Open · Scan
M00645_2.00 NN 70-40% CisBP CGCCCACGCA 60.8% identity Open · Scan
M09515_2.00 NN 70-40% CisBP CCCGCCCACGCA 60.6% identity Open · Scan
MA0472.1 NN 70-40% JASPAR CCCCCGCCCACGCAC 60.6% identity Open · Scan
MA0472.2 NN 70-40% JASPAR ACGCCCACGCA 60.6% identity Open · Scan
M06122_2.00 NN 70-40% CisBP GATACGCCCCCTAA 60.0% identity Open · Scan
M03682_2.00 NN 70-40% CisBP ACGCCACGCCCAGT 59.7% identity Open · Scan
M02903_2.00 NN 70-40% CisBP ATGCCACGCCCCTTTTTG 59.6% identity Open · Scan
MA1514.1 NN 70-40% JASPAR CACCACGCACCCCTT 59.2% identity Open · Scan
M06072_2.00 NN 70-40% CisBP CCACGCCCACGCAC 59.0% identity Open · Scan
M00765_2.00 NN 70-40% CisBP CCCGCCCCC 57.4% identity Open · Scan
M05859_2.00 NN 70-40% CisBP GGCCACGCCCACT 57.4% identity Open · Scan
MA0079.1 NN 70-40% JASPAR GGGGCGGGGT 57.4% identity Open · Scan
MA0685.1 NN 70-40% JASPAR TAAGCCACGCCCCCTTT 57.4% identity Open · Scan
MA0746.1 NN 70-40% JASPAR GCCACGCCCCC 57.4% identity Open · Scan
M01447_2.00 NN 70-40% CisBP TACCCCTGA 57.1% identity Open · Scan
M01883_2.00 NN 70-40% CisBP TGCCCCTGA 57.1% identity Open · Scan
MA1107.1 NN 70-40% JASPAR GGCCACACCCACC 56.7% identity Open · Scan
M00249_2.00 NN 70-40% CisBP ACTCCCCCGCA 55.4% identity Open · Scan
M08968_2.00 NN 70-40% CisBP CCCCCCCTCCTCCCCCGCCC 55.4% identity Open · Scan
MA1627.1 NN 70-40% JASPAR CCCCTCCCCCACAC 55.4% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 55.2% identity Open · Scan
M01042_2.00 NN 70-40% CisBP TGGGACCTGA 54.7% identity Open · Scan
MA0747.1 NN 70-40% JASPAR GCCACGCCCACT 54.1% identity Open · Scan
MA1564.1 NN 70-40% JASPAR GCCACGCCCCCC 54.1% identity Open · Scan
M00632_2.00 NN 70-40% CisBP ACACGCCCCT 54.0% identity Open · Scan
MA0741.1 NN 70-40% JASPAR GCCACGCCCCC 53.2% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 52.6% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 52.6% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 52.5% identity Open · Scan
M00647_2.00 NN 70-40% CisBP CCCCCCC 51.7% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 51.3% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 51.3% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 51.3% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 51.3% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 51.3% identity Open · Scan
MA0516.1 NN 70-40% JASPAR GCCCCGCCCCCTCCC 51.1% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 50.8% identity Open · Scan
M01529_2.00 NN 70-40% CisBP CCCCGCATT 50.7% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 50.5% identity Open · Scan
M01035_2.00 NN 70-40% CisBP CCCCCTTAAT 50.0% identity Open · Scan
M01432_2.00 NN 70-40% CisBP GACGCCAC 50.0% identity Open · Scan
M01537_2.00 NN 70-40% CisBP TACCCCGCAC 50.0% identity Open · Scan
M01538_2.00 NN 70-40% CisBP GCCCCTGA 50.0% identity Open · Scan
M06135_2.00 NN 70-40% CisBP CAGCCACGCCCACCT 50.0% identity Open · Scan
M06466_2.00 NN 70-40% CisBP TCCGCCCCCT 50.0% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 50.0% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 50.0% identity Open · Scan
M08540_2.00 NN 70-40% CisBP CCCCT 50.0% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 302 aa
197-301

Region 197-301 0 PWM

Residues
105 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
2I13
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 197-3011 model
Actions
Predicted = Low TFS_B3KNE6:197:301_2i13_A_1 2i13 197-301 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
219-243PF00096Zinc finger, C2H2 typeoverlaps 197-301
249-273PF00096Zinc finger, C2H2 typeoverlaps 197-301
279-301PF00096Zinc finger, C2H2 typeoverlaps 197-301