Transcription factor

B3KNJ5

cDNA FLJ14691 fis, clone NT2RP2005325, highly similar to LIM/homeobox protein Lhx2

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 406 aa

4 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3

Motif	Prediction	Source	DNA binding	Support	Actions
MA0700.1	NN 70+%	JASPAR	ACTAATTAAC	99.7% identity	Open · Scan
M03107_2.00	NN 70+%	CisBP	TAATTACGCTAATTA	97.8% identity	Open · Scan
MA0701.1	NN 70+%	JASPAR	CCAATTAA	70.0% identity	Open · Scan

Nearest Neighbor (70% - 40%)1

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
M00539_2.00	NN 70-40%	CisBP	GCTGATTAC	51.5% identity		Open · Scan

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 406 aa

265-323

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 265-3231 model

				Actions
Predicted = Low	DIMER_B3KNJ5:265:323_1fjl_A_1	1fjl	265-323	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
53-110	PF00412	LIM domain	No overlap with loaded model regions
115-170	PF00412	LIM domain	No overlap with loaded model regions
267-323	PF00046	Homeodomain	overlaps 265-323